Analysis of interatomic Contacts of Structural Units in PDB entry:
3M6C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3M6C entry

There is 1 chain in PDB entry 3M6C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 184ILE 377
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 3M6C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
199 203Right-handed 310
Helix 2
2
A
227 242Right-handed alpha
Helix 3
3
A
253 266Right-handed alpha
Helix 4
4
A
279 295Right-handed alpha
Helix 5
5
A
300 304Right-handed 310
Helix 6
6
A
306 310Right-handed 310
Helix 7
7
A
311 315Right-handed 310
Helix 8
8
A
336 353Right-handed alpha
Helix 9
9
A
356 374Right-handed alpha
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There are 2 sheets in PDB entry 3M6C. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
191 193first strand
Strand 2
A
328 333anti-parallel
Strand 3
A
316 323anti-parallel
Strand 4
A
211 220anti-parallel
Strand 5
A
245 249parallel
Strand 6
A
271 275parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
224 225first strand
Strand 2
A
251 252parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il