Analysis of interatomic Contacts of Structural Units in PDB entry:
3M7O


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3M7O entry

There are 4 chains in PDB entry 3M7O (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 26SER 162
B
 GLY 26SER 162
C
 GLY 26SER 162
D
 GLY 26SER 162
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 3M7O

There are 8 sheets in PDB entry 3M7O. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 12 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 35first strand
Strand 2
A
38 44anti-parallel
Strand 3
A
151 161anti-parallel
Strand 4
A
136 146anti-parallel
Strand 5
A
80 89anti-parallel
Strand 6
A
92 103anti-parallel
Strand 7
B
92 100anti-parallel
Strand 8
B
82 89anti-parallel
Strand 9
B
136 145anti-parallel
Strand 10
B
151 161anti-parallel
Strand 11
B
38 44anti-parallel
Strand 12
B
30 35anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
52 55first strand
Strand 2
A
67 73anti-parallel
Strand 3
A
119 125anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 62first strand
Strand 2
A
130 132anti-parallel
Strand 3
B
131 132anti-parallel
Strand 4
B
61 62anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
52 55first strand
Strand 2
B
67 73anti-parallel
Strand 3
B
119 125anti-parallel
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There are 12 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
30 35first strand
Strand 2
C
38 44anti-parallel
Strand 3
C
151 161anti-parallel
Strand 4
C
136 146anti-parallel
Strand 5
C
81 89anti-parallel
Strand 6
C
92 100anti-parallel
Strand 7
D
92 102anti-parallel
Strand 8
D
81 89anti-parallel
Strand 9
D
136 146anti-parallel
Strand 10
D
151 161anti-parallel
Strand 11
D
38 44anti-parallel
Strand 12
D
30 35anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
52 55first strand
Strand 2
C
67 73anti-parallel
Strand 3
C
119 125anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
61 62first strand
Strand 2
C
131 132anti-parallel
Strand 3
D
130 132anti-parallel
Strand 4
D
61 62anti-parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
52 55first strand
Strand 2
D
67 73anti-parallel
Strand 3
D
119 125anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il