Analysis of interatomic Contacts of Structural Units in PDB entry:
3M7V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3M7V entry

There are 2 chains in PDB entry 3M7V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 3ILE 403
B
 THR 3ILE 403
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 3M7V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
22 25Right-handed 310
Helix 2
2
A
34 36Right-handed 310
Helix 3
3
A
37 46Right-handed alpha
Helix 4
4
A
50 57Right-handed alpha
Helix 5
5
A
58 61Right-handed 310
Helix 6
6
A
91 100Right-handed alpha
Helix 7
7
A
116 128Right-handed alpha
Helix 8
8
A
132 136Right-handed 310
Helix 9
9
A
140 156Right-handed alpha
Helix 10
10
A
178 192Right-handed alpha
Helix 11
11
A
232 240Right-handed alpha
Helix 12
12
A
249 255Right-handed alpha
Helix 13
13
A
268 281Right-handed alpha
Helix 14
14
A
295 301Right-handed alpha
Helix 15
15
A
306 327Right-handed alpha
Helix 16
16
A
377 388Right-handed alpha
Helix 17
17
A
398 403Right-handed alpha
Helix 18
18
B
22 25Right-handed 310
Helix 19
19
B
34 36Right-handed 310
Helix 20
20
B
37 47Right-handed alpha
Helix 21
21
B
50 57Right-handed alpha
Helix 22
22
B
58 61Right-handed 310
Helix 23
23
B
91 100Right-handed alpha
Helix 24
24
B
116 128Right-handed alpha
Helix 25
25
B
132 136Right-handed 310
Helix 26
26
B
140 156Right-handed alpha
Helix 27
27
B
178 192Right-handed alpha
Helix 28
28
B
232 240Right-handed alpha
Helix 29
29
B
249 254Right-handed alpha
Helix 30
30
B
268 282Right-handed alpha
Helix 31
31
B
295 301Right-handed alpha
Helix 32
32
B
306 328Right-handed alpha
Helix 33
33
B
377 388Right-handed alpha
Helix 34
34
B
398 403Right-handed alpha
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There are 11 sheets in PDB entry 3M7V. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
261 262first strand
Strand 2
A
243 247parallel
Strand 3
A
288 294parallel
Strand 4
A
6 12parallel
Strand 5
A
332 337parallel
Strand 6
A
356 361anti-parallel
Strand 7
A
79 84anti-parallel
Strand 8
A
369 370parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
261 262first strand
Strand 2
A
243 247parallel
Strand 3
A
288 294parallel
Strand 4
A
6 12parallel
Strand 5
A
332 337parallel
Strand 6
A
356 361anti-parallel
Strand 7
A
79 84anti-parallel
Strand 8
A
374 375parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 28first strand
Strand 2
A
31 32anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
159 161first strand
Strand 2
A
167 173anti-parallel
Strand 3
A
202 211parallel
Strand 4
A
214 216anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
159 161first strand
Strand 2
A
167 173anti-parallel
Strand 3
A
202 211parallel
Strand 4
A
222 225anti-parallel
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There are 8 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
261 262first strand
Strand 2
B
244 247parallel
Strand 3
B
288 294parallel
Strand 4
B
6 12parallel
Strand 5
B
332 337parallel
Strand 6
B
356 361anti-parallel
Strand 7
B
79 84anti-parallel
Strand 8
B
369 370parallel
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There are 8 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
261 262first strand
Strand 2
B
244 247parallel
Strand 3
B
288 294parallel
Strand 4
B
6 12parallel
Strand 5
B
332 337parallel
Strand 6
B
356 361anti-parallel
Strand 7
B
79 84anti-parallel
Strand 8
B
374 375parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
27 28first strand
Strand 2
B
31 32anti-parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
159 161first strand
Strand 2
B
167 173anti-parallel
Strand 3
B
202 211parallel
Strand 4
B
214 217anti-parallel
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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
159 161first strand
Strand 2
B
167 173anti-parallel
Strand 3
B
202 211parallel
Strand 4
B
222 225anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
194 195first strand
Strand 2
B
198 199anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il