Analysis of interatomic Contacts of Structural Units in PDB entry:
3M7W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3M7W entry

There are 6 chains in PDB entry 3M7W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 2ALA 252
B
 LYS 2ALA 252
C
 LYS 2ALA 252
D
 MET 1ALA 252
E
 LYS 2ALA 252
F
 LYS 2ALA 252
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 72 helices in PDB entry 3M7W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
26 38Right-handed alpha
Helix 2
2
A
50 52Right-handed 310
Helix 3
3
A
57 72Right-handed alpha
Helix 4
4
A
83 87Right-handed 310
Helix 5
5
A
93 108Right-handed alpha
Helix 6
6
A
120 134Right-handed alpha
Helix 7
7
A
150 164Right-handed alpha
Helix 8
8
A
177 195Right-handed alpha
Helix 9
9
A
206 209Right-handed 310
Helix 10
10
A
210 215Right-handed alpha
Helix 11
11
A
215 220Right-handed alpha
Helix 12
12
A
238 252Right-handed alpha
Helix 13
13
B
26 38Right-handed alpha
Helix 14
14
B
50 52Right-handed 310
Helix 15
15
B
57 72Right-handed alpha
Helix 16
16
B
83 87Right-handed 310
Helix 17
17
B
93 108Right-handed alpha
Helix 18
18
B
120 133Right-handed alpha
Helix 19
19
B
150 164Right-handed alpha
Helix 20
20
B
177 195Right-handed alpha
Helix 21
21
B
206 209Right-handed 310
Helix 22
22
B
210 215Right-handed alpha
Helix 23
23
B
215 220Right-handed alpha
Helix 24
24
B
238 252Right-handed alpha
Helix 25
25
C
26 38Right-handed alpha
Helix 26
26
C
50 52Right-handed 310
Helix 27
27
C
57 72Right-handed alpha
Helix 28
28
C
83 87Right-handed 310
Helix 29
29
C
93 108Right-handed alpha
Helix 30
30
C
120 134Right-handed alpha
Helix 31
31
C
150 164Right-handed alpha
Helix 32
32
C
177 195Right-handed alpha
Helix 33
33
C
205 210Right-handed alpha
Helix 34
34
C
210 215Right-handed alpha
Helix 35
35
C
215 220Right-handed alpha
Helix 36
36
C
238 252Right-handed alpha
Helix 37
37
D
26 38Right-handed alpha
Helix 38
38
D
50 52Right-handed 310
Helix 39
39
D
57 72Right-handed alpha
Helix 40
40
D
83 87Right-handed 310
Helix 41
41
D
93 108Right-handed alpha
Helix 42
42
D
120 134Right-handed alpha
Helix 43
43
D
150 164Right-handed alpha
Helix 44
44
D
177 195Right-handed alpha
Helix 45
45
D
206 209Right-handed 310
Helix 46
46
D
210 215Right-handed alpha
Helix 47
47
D
215 220Right-handed alpha
Helix 48
48
D
238 251Right-handed alpha
Helix 49
49
E
26 38Right-handed alpha
Helix 50
50
E
50 52Right-handed 310
Helix 51
51
E
57 70Right-handed alpha
Helix 52
52
E
83 87Right-handed 310
Helix 53
53
E
93 108Right-handed alpha
Helix 54
54
E
120 134Right-handed alpha
Helix 55
55
E
150 164Right-handed alpha
Helix 56
56
E
177 195Right-handed alpha
Helix 57
57
E
205 210Right-handed alpha
Helix 58
58
E
211 214Right-handed 310
Helix 59
59
E
215 220Right-handed alpha
Helix 60
60
E
238 251Right-handed alpha
Helix 61
61
F
26 38Right-handed alpha
Helix 62
62
F
50 52Right-handed 310
Helix 63
63
F
57 72Right-handed alpha
Helix 64
64
F
83 87Right-handed 310
Helix 65
65
F
93 108Right-handed alpha
Helix 66
66
F
120 134Right-handed alpha
Helix 67
67
F
150 164Right-handed alpha
Helix 68
68
F
177 195Right-handed alpha
Helix 69
69
F
206 209Right-handed 310
Helix 70
70
F
210 215Right-handed alpha
Helix 71
71
F
215 220Right-handed alpha
Helix 72
72
F
238 251Right-handed alpha
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There are 12 sheets in PDB entry 3M7W. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 6first strand
Strand 2
A
9 11anti-parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
201 204first strand
Strand 2
A
168 173parallel
Strand 3
A
137 144parallel
Strand 4
A
112 116parallel
Strand 5
A
77 80parallel
Strand 6
A
44 48parallel
Strand 7
A
17 22parallel
Strand 8
A
223 226parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
4 6first strand
Strand 2
B
9 11anti-parallel
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There are 8 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
201 204first strand
Strand 2
B
168 173parallel
Strand 3
B
137 144parallel
Strand 4
B
112 116parallel
Strand 5
B
77 80parallel
Strand 6
B
44 48parallel
Strand 7
B
17 22parallel
Strand 8
B
223 225parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
4 6first strand
Strand 2
C
9 11anti-parallel
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There are 8 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
201 204first strand
Strand 2
C
168 173parallel
Strand 3
C
137 144parallel
Strand 4
C
112 116parallel
Strand 5
C
77 80parallel
Strand 6
C
44 48parallel
Strand 7
C
17 22parallel
Strand 8
C
223 225parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
4 6first strand
Strand 2
D
9 11anti-parallel
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There are 8 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
201 204first strand
Strand 2
D
168 173parallel
Strand 3
D
137 144parallel
Strand 4
D
112 116parallel
Strand 5
D
77 80parallel
Strand 6
D
44 48parallel
Strand 7
D
17 22parallel
Strand 8
D
223 225parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
4 6first strand
Strand 2
E
9 11anti-parallel
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There are 8 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
201 204first strand
Strand 2
E
168 173parallel
Strand 3
E
137 144parallel
Strand 4
E
112 116parallel
Strand 5
E
77 80parallel
Strand 6
E
44 48parallel
Strand 7
E
17 22parallel
Strand 8
E
223 225parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
4 6first strand
Strand 2
F
9 11anti-parallel
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There are 8 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
201 204first strand
Strand 2
F
168 173parallel
Strand 3
F
137 144parallel
Strand 4
F
112 116parallel
Strand 5
F
77 80parallel
Strand 6
F
44 48parallel
Strand 7
F
17 22parallel
Strand 8
F
223 225parallel
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