Analysis of interatomic Contacts of Structural Units in PDB entry:
3MA5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3MA5 entry

There are 4 chains in PDB entry 3MA5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 59GLU 148
B
 GLU 59GLU 148
C
 ASP 60GLU 148
D
 SER 78GLU 145
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 3MA5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
60 74Right-handed alpha
Helix 2
2
A
76 91Right-handed alpha
Helix 3
3
A
95 108Right-handed alpha
Helix 4
4
A
110 129Right-handed alpha
Helix 5
5
A
130 146Right-handed alpha
Helix 6
6
B
60 74Right-handed alpha
Helix 7
7
B
76 91Right-handed alpha
Helix 8
8
B
96 108Right-handed alpha
Helix 9
9
B
110 129Right-handed alpha
Helix 10
10
B
130 147Right-handed alpha
Helix 11
11
C
60 74Right-handed alpha
Helix 12
12
C
76 91Right-handed alpha
Helix 13
13
C
96 108Right-handed alpha
Helix 14
14
C
110 128Right-handed alpha
Helix 15
15
C
130 146Right-handed alpha
Helix 16
16
D
80 91Right-handed alpha
Helix 17
17
D
96 101Right-handed alpha
Helix 18
18
D
101 108Right-handed alpha
Helix 19
19
D
111 118Right-handed alpha
Helix 20
20
D
119 129Right-handed alpha
Helix 21
21
D
130 145Right-handed alpha
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There are no sheets in PDB entry 3MA5
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il