Analysis of interatomic Contacts of Structural Units in PDB entry:
3MA6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3MA6 entry

There are 2 chains in PDB entry 3MA6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 29LYS 296
B
 ILE 29THR 295
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 3MA6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
75 89Right-handed alpha
Helix 2
2
A
118 126Right-handed alpha
Helix 3
3
A
130 151Right-handed alpha
Helix 4
4
A
159 161Right-handed 310
Helix 5
5
A
180 185Right-handed alpha
Helix 6
6
A
193 199Right-handed alpha
Helix 7
7
A
202 208Right-handed alpha
Helix 8
8
A
213 229Right-handed alpha
Helix 9
9
A
237 248Right-handed alpha
Helix 10
10
A
254 258Right-handed 310
Helix 11
11
A
261 272Right-handed alpha
Helix 12
12
A
281 287Right-handed alpha
Helix 13
13
A
288 294Right-handed alpha
Helix 14
14
B
29 33Right-handed alpha
Helix 15
15
B
77 86Right-handed alpha
Helix 16
16
B
119 127Right-handed alpha
Helix 17
17
B
130 150Right-handed alpha
Helix 18
18
B
190 199Right-handed alpha
Helix 19
19
B
202 208Right-handed alpha
Helix 20
20
B
213 229Right-handed alpha
Helix 21
21
B
237 248Right-handed alpha
Helix 22
22
B
254 258Right-handed 310
Helix 23
23
B
261 272Right-handed alpha
Helix 24
24
B
281 286Right-handed alpha
Helix 25
25
B
288 295Right-handed alpha
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There are 4 sheets in PDB entry 3MA6. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
34 42first strand
Strand 2
A
47 53anti-parallel
Strand 3
A
59 64anti-parallel
Strand 4
A
107 112anti-parallel
Strand 5
A
97 102anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
163 165first strand
Strand 2
A
174 176anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
34 42first strand
Strand 2
B
46 53anti-parallel
Strand 3
B
59 66anti-parallel
Strand 4
B
106 111anti-parallel
Strand 5
B
97 102anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
117 118first strand
Strand 2
B
163 165anti-parallel
Strand 3
B
174 176anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il