Analysis of interatomic Contacts of Structural Units in PDB entry:
3MAV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3MAV entry

There are 4 chains in PDB entry 3MAV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 34LEU 391
B
 LEU 33LEU 391
C
 SER 31THR 393
D
 SER 26THR 393
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 71 helices in PDB entry 3MAV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
34 53Right-handed alpha
Helix 2
2
A
57 77Right-handed alpha
Helix 3
3
A
81 96Right-handed alpha
Helix 4
4
A
100 129Right-handed alpha
Helix 5
5
A
140 143Right-handed 310
Helix 6
6
A
146 171Right-handed alpha
Helix 7
7
A
175 200Right-handed alpha
Helix 8
8
A
202 207Right-handed alpha
Helix 9
9
A
226 230Right-handed 310
Helix 10
10
A
231 243Right-handed alpha
Helix 11
11
A
243 248Right-handed alpha
Helix 12
12
A
248 259Right-handed alpha
Helix 13
13
A
266 292Right-handed alpha
Helix 14
14
A
311 321Right-handed alpha
Helix 15
15
A
322 333Right-handed alpha
Helix 16
16
A
337 351Right-handed alpha
Helix 17
17
A
352 374Right-handed alpha
Helix 18
18
A
377 391Right-handed alpha
Helix 19
19
B
33 39Right-handed alpha
Helix 20
20
B
39 53Right-handed alpha
Helix 21
21
B
57 77Right-handed alpha
Helix 22
22
B
81 95Right-handed alpha
Helix 23
23
B
100 129Right-handed alpha
Helix 24
24
B
140 143Right-handed 310
Helix 25
25
B
146 171Right-handed alpha
Helix 26
26
B
175 200Right-handed alpha
Helix 27
27
B
202 207Right-handed alpha
Helix 28
28
B
231 243Right-handed alpha
Helix 29
29
B
243 248Right-handed alpha
Helix 30
30
B
248 259Right-handed alpha
Helix 31
31
B
266 291Right-handed alpha
Helix 32
32
B
311 321Right-handed alpha
Helix 33
33
B
322 333Right-handed alpha
Helix 34
34
B
342 348Right-handed alpha
Helix 35
35
B
352 373Right-handed alpha
Helix 36
36
B
377 390Right-handed alpha
Helix 37
37
C
31 39Right-handed alpha
Helix 38
38
C
39 53Right-handed alpha
Helix 39
39
C
57 77Right-handed alpha
Helix 40
40
C
81 95Right-handed alpha
Helix 41
41
C
100 129Right-handed alpha
Helix 42
42
C
139 143Right-handed 310
Helix 43
43
C
146 171Right-handed alpha
Helix 44
44
C
175 200Right-handed alpha
Helix 45
45
C
231 243Right-handed alpha
Helix 46
46
C
243 248Right-handed alpha
Helix 47
47
C
248 259Right-handed alpha
Helix 48
48
C
266 291Right-handed alpha
Helix 49
49
C
311 321Right-handed alpha
Helix 50
50
C
322 333Right-handed alpha
Helix 51
51
C
338 351Right-handed alpha
Helix 52
52
C
352 373Right-handed alpha
Helix 53
53
C
377 391Right-handed alpha
Helix 54
54
D
26 39Right-handed alpha
Helix 55
55
D
39 53Right-handed alpha
Helix 56
56
D
57 77Right-handed alpha
Helix 57
57
D
81 95Right-handed alpha
Helix 58
58
D
100 129Right-handed alpha
Helix 59
59
D
140 143Right-handed 310
Helix 60
60
D
146 171Right-handed alpha
Helix 61
61
D
175 200Right-handed alpha
Helix 62
62
D
226 230Right-handed 310
Helix 63
63
D
231 243Right-handed alpha
Helix 64
64
D
243 248Right-handed alpha
Helix 65
65
D
248 260Right-handed alpha
Helix 66
66
D
266 292Right-handed alpha
Helix 67
67
D
311 321Right-handed alpha
Helix 68
68
D
322 333Right-handed alpha
Helix 69
69
D
339 351Right-handed alpha
Helix 70
70
D
352 374Right-handed alpha
Helix 71
71
D
377 391Right-handed alpha
Back to top of page

There are 3 sheets in PDB entry 3MAV. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
133 134first strand
Strand 2
A
137 138anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
133 134first strand
Strand 2
B
137 138anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
133 134first strand
Strand 2
D
137 138anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il