Analysis of interatomic Contacts of Structural Units in PDB entry:
3MAW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3MAW entry

There are 2 chains in PDB entry 3MAW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 34VAL 493
B
 GLY 34VAL 493
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 3MAW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
35 40Right-handed 310
Helix 2
2
A
77 101Right-handed alpha
Helix 3
3
A
147 191Right-handed alpha
Helix 4
4
A
195 221Right-handed alpha
Helix 5
5
A
221 227Right-handed alpha
Helix 6
6
A
234 242Right-handed alpha
Helix 7
7
A
245 254Right-handed alpha
Helix 8
8
A
256 258Right-handed 310
Helix 9
9
A
259 265Right-handed alpha
Helix 10
10
A
356 365Right-handed alpha
Helix 11
11
A
366 370Right-handed 310
Helix 12
12
A
463 487Right-handed alpha
Helix 13
13
B
35 40Right-handed 310
Helix 14
14
B
77 101Right-handed alpha
Helix 15
15
B
147 191Right-handed alpha
Helix 16
16
B
195 221Right-handed alpha
Helix 17
17
B
221 227Right-handed alpha
Helix 18
18
B
234 242Right-handed alpha
Helix 19
19
B
245 254Right-handed alpha
Helix 20
20
B
256 258Right-handed 310
Helix 21
21
B
259 265Right-handed alpha
Helix 22
22
B
356 365Right-handed alpha
Helix 23
23
B
366 370Right-handed 310
Helix 24
24
B
463 487Right-handed alpha
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There are 10 sheets in PDB entry 3MAW. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
338 340first strand
Strand 2
A
344 347anti-parallel
Strand 3
A
42 52parallel
Strand 4
A
293 305anti-parallel
Strand 5
A
322 326anti-parallel
Strand 6
A
329 333anti-parallel
Strand 7
A
352 353anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 64first strand
Strand 2
A
282 289anti-parallel
Strand 3
A
270 277anti-parallel
Strand 4
A
231 232anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
307 308first strand
Strand 2
A
315 317anti-parallel
Strand 3
A
372 373anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
383 386first strand
Strand 2
A
389 392anti-parallel
Strand 3
A
417 419anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
407 408first strand
Strand 2
A
399 401anti-parallel
Strand 3
A
427 428anti-parallel
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There are 7 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
338 340first strand
Strand 2
B
344 347anti-parallel
Strand 3
B
42 52parallel
Strand 4
B
293 305anti-parallel
Strand 5
B
322 326anti-parallel
Strand 6
B
329 333anti-parallel
Strand 7
B
352 353anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
57 64first strand
Strand 2
B
282 289anti-parallel
Strand 3
B
270 277anti-parallel
Strand 4
B
231 232anti-parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
307 308first strand
Strand 2
B
315 317anti-parallel
Strand 3
B
372 373anti-parallel
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There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
383 386first strand
Strand 2
B
389 392anti-parallel
Strand 3
B
417 419anti-parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
407 408first strand
Strand 2
B
399 401anti-parallel
Strand 3
B
427 428anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il