Analysis of interatomic Contacts of Structural Units in PDB entry:
3MBR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3MBR entry

There is 1 chain in PDB entry 3MBR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
X
 PRO 24HIS 259
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There is 1 helix in PDB entry 3MBR. Click on helix number for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
X
210 213Right-handed 310
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There are 6 sheets in PDB entry 3MBR. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
30 37first strand
Strand 2
X
248 254anti-parallel
Strand 3
X
238 243anti-parallel
Strand 4
X
227 233anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
44 50first strand
Strand 2
X
53 58anti-parallel
Strand 3
X
65 70anti-parallel
Strand 4
X
76 81anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
88 94first strand
Strand 2
X
97 102anti-parallel
Strand 3
X
107 112anti-parallel
Strand 4
X
117 123anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
130 133first strand
Strand 2
X
138 141anti-parallel
Strand 3
X
146 150anti-parallel
Strand 4
X
157 162anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
164 165first strand
Strand 2
X
168 169anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
X
173 179first strand
Strand 2
X
182 187anti-parallel
Strand 3
X
192 196anti-parallel
Strand 4
X
203 208anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il