Analysis of interatomic Contacts of Structural Units in PDB entry:
3MC0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3MC0 entry

There are 4 chains in PDB entry 3MC0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2LEU 116
B
 GLN 1HIS 233
C
 ALA 2LEU 116
D
 PRO 2HIS 233
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 15 helices in PDB entry 3MC0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
82 86Right-handed 310
Helix 2
2
B
5 9Right-handed 310
Helix 3
3
B
11 18Right-handed alpha
Helix 4
4
B
22 31Right-handed alpha
Helix 5
5
B
68 76Right-handed alpha
Helix 6
6
B
151 167Right-handed alpha
Helix 7
7
B
206 211Right-handed alpha
Helix 8
8
B
212 216Right-handed 310
Helix 9
9
C
82 86Right-handed 310
Helix 10
10
D
11 18Right-handed alpha
Helix 11
11
D
22 31Right-handed alpha
Helix 12
12
D
68 76Right-handed alpha
Helix 13
13
D
151 167Right-handed alpha
Helix 14
14
D
206 211Right-handed alpha
Helix 15
15
D
212 216Right-handed 310
Back to top of page

There are 14 sheets in PDB entry 3MC0. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
4 7first strand
Strand 2
A
19 25anti-parallel
Strand 3
A
73 78anti-parallel
Strand 4
A
65 70anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 14first strand
Strand 2
A
111 116parallel
Strand 3
A
87 95anti-parallel
Strand 4
A
31 38anti-parallel
Strand 5
A
42 49anti-parallel
Strand 6
A
56 57anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 14first strand
Strand 2
A
111 116parallel
Strand 3
A
87 95anti-parallel
Strand 4
A
98 107anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
34 39first strand
Strand 2
B
80 84anti-parallel
Strand 3
B
113 115anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
49 52first strand
Strand 2
B
62 65anti-parallel
Strand 3
B
107 110parallel
Back to list of sheets
Back to top of page

There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
136 144first strand
Strand 2
B
124 132anti-parallel
Strand 3
B
225 231parallel
Strand 4
B
178 184anti-parallel
Strand 5
B
190 194anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
148 150first strand
Strand 2
B
218 220anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
4 7first strand
Strand 2
C
19 25anti-parallel
Strand 3
C
73 78anti-parallel
Strand 4
C
65 67anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
10 14first strand
Strand 2
C
111 116parallel
Strand 3
C
87 95anti-parallel
Strand 4
C
31 38anti-parallel
Strand 5
C
42 49anti-parallel
Strand 6
C
56 57anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
10 14first strand
Strand 2
C
111 116parallel
Strand 3
C
87 95anti-parallel
Strand 4
C
98 107anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
34 39first strand
Strand 2
D
80 84anti-parallel
Strand 3
D
113 115anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
49 52first strand
Strand 2
D
62 65anti-parallel
Strand 3
D
107 110parallel
Back to list of sheets
Back to top of page

There are 5 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
135 144first strand
Strand 2
D
124 132anti-parallel
Strand 3
D
225 231parallel
Strand 4
D
178 184anti-parallel
Strand 5
D
190 194anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
148 150first strand
Strand 2
D
218 220anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il