Analysis of interatomic Contacts of Structural Units in PDB entry:
3MC1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3MC1 entry

There are 2 chains in PDB entry 3MC1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 0LEU 215
B
 TYR 2ARG 216
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 3MC1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 30Right-handed alpha
Helix 2
2
A
37 45Right-handed 310
Helix 3
3
A
48 58Right-handed alpha
Helix 4
4
A
60 76Right-handed alpha
Helix 5
5
A
78 82Right-handed 310
Helix 6
6
A
88 100Right-handed alpha
Helix 7
7
A
111 121Right-handed alpha
Helix 8
8
A
123 127Right-handed 310
Helix 9
9
A
141 154Right-handed alpha
Helix 10
10
A
156 158Right-handed 310
Helix 11
11
A
166 175Right-handed alpha
Helix 12
12
A
189 197Right-handed alpha
Helix 13
13
A
204 214Right-handed alpha
Helix 14
14
B
16 29Right-handed alpha
Helix 15
15
B
30 32Right-handed 310
Helix 16
16
B
37 45Right-handed 310
Helix 17
17
B
48 57Right-handed alpha
Helix 18
18
B
60 78Right-handed alpha
Helix 19
19
B
79 82Right-handed 310
Helix 20
20
B
88 99Right-handed alpha
Helix 21
21
B
111 121Right-handed alpha
Helix 22
22
B
123 125Right-handed 310
Helix 23
23
B
141 154Right-handed alpha
Helix 24
24
B
156 158Right-handed 310
Helix 25
25
B
166 176Right-handed alpha
Helix 26
26
B
189 197Right-handed alpha
Helix 27
27
B
204 216Right-handed alpha
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There are 3 sheets in PDB entry 3MC1. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
129 133first strand
Strand 2
A
102 110parallel
Strand 3
A
4 7parallel
Strand 4
A
160 164parallel
Strand 5
A
180 183parallel
Strand 6
A
200 202parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
127 133first strand
Strand 2
B
102 110parallel
Strand 3
B
4 7parallel
Strand 4
B
160 164parallel
Strand 5
B
180 183parallel
Strand 6
B
200 202parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
14 15first strand
Strand 2
B
84 85anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il