Analysis of interatomic Contacts of Structural Units in PDB entry:
3MCQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3MCQ entry

There is 1 chain in PDB entry 3MCQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 7THR 308
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 3MCQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
24 29Right-handed 310
Helix 2
2
A
56 75Right-handed alpha
Helix 3
3
A
92 110Right-handed alpha
Helix 4
4
A
158 168Right-handed alpha
Helix 5
5
A
174 187Right-handed alpha
Helix 6
6
A
191 198Right-handed alpha
Helix 7
7
A
211 224Right-handed alpha
Helix 8
8
A
232 234Right-handed 310
Helix 9
9
A
237 243Right-handed alpha
Helix 10
10
A
246 256Right-handed alpha
Helix 11
11
A
270 281Right-handed alpha
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There are 2 sheets in PDB entry 3MCQ. Click on sheet of interest to get list of strands forming it: A, B,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 17first strand
Strand 2
A
113 121anti-parallel
Strand 3
A
78 88parallel
Strand 4
A
125 134anti-parallel
Strand 5
A
37 46anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
202 207first strand
Strand 2
A
262 267anti-parallel
Strand 3
A
149 153anti-parallel
Strand 4
A
286 292anti-parallel
Strand 5
A
226 230anti-parallel
Strand 6
A
297 300parallel
Strand 7
A
306 307anti-parallel
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