Analysis of interatomic Contacts of Structural Units in PDB entry:
3MCZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3MCZ entry

There are 2 chains in PDB entry 3MCZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 8GLY 348
B
 ALA 18GLU 349
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 3MCZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
21 31Right-handed alpha
Helix 2
2
A
31 44Right-handed alpha
Helix 3
3
A
45 50Right-handed alpha
Helix 4
4
A
55 64Right-handed alpha
Helix 5
5
A
66 80Right-handed alpha
Helix 6
6
A
93 101Right-handed alpha
Helix 7
7
A
108 117Right-handed alpha
Helix 8
8
A
121 123Right-handed 310
Helix 9
9
A
124 130Right-handed alpha
Helix 10
10
A
138 143Right-handed alpha
Helix 11
11
A
146 170Right-handed alpha
Helix 12
12
A
171 175Right-handed 310
Helix 13
13
A
188 198Right-handed alpha
Helix 14
14
A
208 210Right-handed 310
Helix 15
15
A
211 222Right-handed alpha
Helix 16
16
A
224 226Right-handed 310
Helix 17
17
A
237 242Right-handed 310
Helix 18
18
A
254 258Right-handed 310
Helix 19
19
A
259 273Right-handed alpha
Helix 20
20
A
294 308Right-handed alpha
Helix 21
21
A
315 326Right-handed alpha
Helix 22
22
B
21 31Right-handed alpha
Helix 23
23
B
31 44Right-handed alpha
Helix 24
24
B
45 50Right-handed alpha
Helix 25
25
B
55 64Right-handed alpha
Helix 26
26
B
66 80Right-handed alpha
Helix 27
27
B
93 100Right-handed alpha
Helix 28
28
B
108 117Right-handed alpha
Helix 29
29
B
121 123Right-handed 310
Helix 30
30
B
124 130Right-handed alpha
Helix 31
31
B
138 146Right-handed alpha
Helix 32
32
B
146 161Right-handed alpha
Helix 33
33
B
161 170Right-handed alpha
Helix 34
34
B
171 175Right-handed 310
Helix 35
35
B
188 198Right-handed alpha
Helix 36
36
B
208 210Right-handed 310
Helix 37
37
B
211 222Right-handed alpha
Helix 38
38
B
237 242Right-handed 310
Helix 39
39
B
254 258Right-handed 310
Helix 40
40
B
259 273Right-handed alpha
Helix 41
41
B
294 308Right-handed alpha
Helix 42
42
B
315 326Right-handed alpha
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There are 4 sheets in PDB entry 3MCZ. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
83 86first strand
Strand 2
A
89 92anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
228 232first strand
Strand 2
A
202 207parallel
Strand 3
A
179 183parallel
Strand 4
A
246 252parallel
Strand 5
A
274 285parallel
Strand 6
A
338 344anti-parallel
Strand 7
A
329 335anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
83 86first strand
Strand 2
B
89 92anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
228 232first strand
Strand 2
B
202 207parallel
Strand 3
B
179 183parallel
Strand 4
B
246 252parallel
Strand 5
B
274 285parallel
Strand 6
B
338 344anti-parallel
Strand 7
B
329 335anti-parallel
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