Analysis of interatomic Contacts of Structural Units in PDB entry:
3MF0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3MF0 entry

There are 2 chains in PDB entry 3MF0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 102ARG 519
B
 ILE 101ASN 520
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 3MF0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
102 106Right-handed 310
Helix 2
2
A
148 161Right-handed alpha
Helix 3
3
A
164 180Right-handed alpha
Helix 4
4
A
228 237Right-handed alpha
Helix 5
5
A
244 248Right-handed 310
Helix 6
6
A
253 260Right-handed alpha
Helix 7
7
A
296 342Right-handed alpha
Helix 8
8
A
346 363Right-handed alpha
Helix 9
9
A
409 419Right-handed alpha
Helix 10
10
A
485 517Right-handed alpha
Helix 11
11
B
102 107Right-handed 310
Helix 12
12
B
148 161Right-handed alpha
Helix 13
13
B
164 178Right-handed alpha
Helix 14
14
B
229 237Right-handed alpha
Helix 15
15
B
253 260Right-handed alpha
Helix 16
16
B
298 339Right-handed alpha
Helix 17
17
B
340 343Right-handed 310
Helix 18
18
B
346 363Right-handed alpha
Helix 19
19
B
410 419Right-handed alpha
Helix 20
20
B
485 514Right-handed alpha
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There are 8 sheets in PDB entry 3MF0. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
115 117first strand
Strand 2
A
121 123anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
204 205first strand
Strand 2
A
184 189anti-parallel
Strand 3
A
278 285anti-parallel
Strand 4
A
266 272anti-parallel
Strand 5
A
240 242anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
191 192first strand
Strand 2
A
198 199anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
380 387first strand
Strand 2
A
366 372anti-parallel
Strand 3
A
464 471anti-parallel
Strand 4
A
451 457anti-parallel
Strand 5
A
422 424anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
115 116first strand
Strand 2
B
122 123anti-parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
221 223first strand
Strand 2
B
200 205anti-parallel
Strand 3
B
182 190anti-parallel
Strand 4
B
278 287anti-parallel
Strand 5
B
266 272anti-parallel
Strand 6
B
240 242anti-parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
382 387first strand
Strand 2
B
366 371anti-parallel
Strand 3
B
466 471anti-parallel
Strand 4
B
451 456anti-parallel
Strand 5
B
422 424anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
473 474first strand
Strand 2
B
481 482anti-parallel
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