Analysis of interatomic Contacts of Structural Units in PDB entry:
3MGC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3MGC entry

There are 2 chains in PDB entry 3MGC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER -31GLY 285
B
 MET 1GLY 285
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 27 helices in PDB entry 3MGC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
-27 -23Right-handed 310
Helix 2
2
A
14 28Right-handed alpha
Helix 3
3
A
35 42Right-handed alpha
Helix 4
4
A
43 50Right-handed alpha
Helix 5
5
A
72 79Right-handed 310
Helix 6
6
A
91 103Right-handed alpha
Helix 7
7
A
109 124Right-handed alpha
Helix 8
8
A
141 151Right-handed alpha
Helix 9
9
A
152 155Right-handed 310
Helix 10
10
A
167 173Right-handed alpha
Helix 11
11
A
173 185Right-handed alpha
Helix 12
12
A
192 203Right-handed alpha
Helix 13
13
A
253 256Right-handed 310
Helix 14
14
A
257 268Right-handed alpha
Helix 15
15
A
275 281Right-handed alpha
Helix 16
16
B
14 27Right-handed alpha
Helix 17
17
B
43 50Right-handed alpha
Helix 18
18
B
72 79Right-handed 310
Helix 19
19
B
91 103Right-handed alpha
Helix 20
20
B
109 123Right-handed alpha
Helix 21
21
B
141 151Right-handed alpha
Helix 22
22
B
167 173Right-handed alpha
Helix 23
23
B
173 186Right-handed alpha
Helix 24
24
B
192 210Right-handed alpha
Helix 25
25
B
253 256Right-handed 310
Helix 26
26
B
257 269Right-handed alpha
Helix 27
27
B
273 282Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 3MGC. Click on sheet of interest to get list of strands forming it: A, B,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 66first strand
Strand 2
A
3 9parallel
Strand 3
A
82 89parallel
Strand 4
A
161 166parallel
Back to list of sheets
Back to top of page

There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
62 66first strand
Strand 2
B
4 9parallel
Strand 3
B
82 89parallel
Strand 4
B
161 166parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il