Analysis of interatomic Contacts of Structural Units in PDB entry:
3MGG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3MGG entry

There are 2 chains in PDB entry 3MGG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 21LYS 266
B
 LEU 16GLY 268
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 27 helices in PDB entry 3MGG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
21 29Right-handed alpha
Helix 2
2
A
47 57Right-handed alpha
Helix 3
3
A
68 82Right-handed alpha
Helix 4
4
A
93 97Right-handed 310
Helix 5
5
A
112 116Right-handed 310
Helix 6
6
A
118 129Right-handed alpha
Helix 7
7
A
152 169Right-handed alpha
Helix 8
8
A
174 177Right-handed 310
Helix 9
9
A
178 186Right-handed alpha
Helix 10
10
A
204 211Right-handed alpha
Helix 11
11
A
215 222Right-handed alpha
Helix 12
12
A
223 230Right-handed alpha
Helix 13
13
A
234 248Right-handed alpha
Helix 14
14
B
16 23Right-handed alpha
Helix 15
15
B
23 28Right-handed alpha
Helix 16
16
B
47 57Right-handed alpha
Helix 17
17
B
68 82Right-handed alpha
Helix 18
18
B
112 116Right-handed 310
Helix 19
19
B
118 129Right-handed alpha
Helix 20
20
B
143 146Right-handed 310
Helix 21
21
B
152 169Right-handed alpha
Helix 22
22
B
174 177Right-handed 310
Helix 23
23
B
178 186Right-handed alpha
Helix 24
24
B
204 212Right-handed alpha
Helix 25
25
B
215 222Right-handed alpha
Helix 26
26
B
223 230Right-handed alpha
Helix 27
27
B
234 248Right-handed alpha
Back to top of page

There are 3 sheets in PDB entry 3MGG. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
87 91first strand
Strand 2
A
61 66parallel
Strand 3
A
38 41parallel
Strand 4
A
104 110parallel
Strand 5
A
130 149parallel
Strand 6
A
254 265anti-parallel
Strand 7
A
189 200anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
87 91first strand
Strand 2
B
61 66parallel
Strand 3
B
38 41parallel
Strand 4
B
104 110parallel
Strand 5
B
130 141parallel
Strand 6
B
254 265anti-parallel
Strand 7
B
147 149anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
87 91first strand
Strand 2
B
61 66parallel
Strand 3
B
38 41parallel
Strand 4
B
104 110parallel
Strand 5
B
130 141parallel
Strand 6
B
254 265anti-parallel
Strand 7
B
189 200anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il