Analysis of interatomic Contacts of Structural Units in PDB entry:
3MGU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3MGU entry

There is 1 chain in PDB entry 3MGU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 26CYS 635
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 3MGU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
31 35Right-handed 310
Helix 2
2
A
36 50Right-handed alpha
Helix 3
3
A
63 78Right-handed alpha
Helix 4
4
A
112 121Right-handed alpha
Helix 5
5
A
122 133Right-handed alpha
Helix 6
6
A
182 186Right-handed 310
Helix 7
7
A
260 265Right-handed alpha
Helix 8
8
A
276 283Right-handed 310
Helix 9
9
A
293 304Right-handed alpha
Helix 10
10
A
331 339Right-handed alpha
Helix 11
11
A
343 348Right-handed alpha
Helix 12
12
A
348 363Right-handed alpha
Helix 13
13
A
372 390Right-handed alpha
Helix 14
14
A
395 399Right-handed 310
Helix 15
15
A
427 437Right-handed alpha
Helix 16
16
A
442 453Right-handed alpha
Helix 17
17
A
462 478Right-handed alpha
Helix 18
18
A
480 492Right-handed alpha
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There are 6 sheets in PDB entry 3MGU. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 58first strand
Strand 2
A
215 219anti-parallel
Strand 3
A
166 174anti-parallel
Strand 4
A
237 246anti-parallel
Strand 5
A
145 151anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
82 84first strand
Strand 2
A
88 91anti-parallel
Strand 3
A
155 159anti-parallel
Strand 4
A
226 229anti-parallel
Strand 5
A
189 192anti-parallel
Strand 6
A
206 208anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
290 291first strand
Strand 2
A
497 505anti-parallel
Strand 3
A
623 634anti-parallel
Strand 4
A
415 417first strand
Strand 5
A
404 405anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
364 367first strand
Strand 2
A
596 604anti-parallel
Strand 3
A
529 540anti-parallel
Strand 4
A
623 634anti-parallel
Strand 5
A
497 505anti-parallel
Strand 6
A
493 495first strand
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
412 413first strand
Strand 2
A
511 512anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
588 592first strand
Strand 2
A
555 559anti-parallel
Strand 3
A
608 612anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il