Analysis of interatomic Contacts of Structural Units in PDB entry:
3MHV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3MHV entry

There are 2 chains in PDB entry 3MHV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 GLY 297THR 413
A
 ASP 289ILE 330
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 7 helices in PDB entry 3MHV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
C
302 313Right-handed alpha
Helix 2
2
C
320 331Right-handed alpha
Helix 3
3
C
335 346Right-handed alpha
Helix 4
4
C
348 357Right-handed alpha
Helix 5
5
C
402 412Right-handed alpha
Helix 6
6
A
292 309Right-handed alpha
Helix 7
7
A
312 330Right-handed alpha
Back to top of page

There is 1 sheet ( A) in PDB entry 3MHV.

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
360 362first strand
Strand 2
C
373 375anti-parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il