Analysis of interatomic Contacts of Structural Units in PDB entry:
3MIL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3MIL entry

There are 2 chains in PDB entry 3MIL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 240
B
 MET 1SER 238
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 3MIL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 16Right-handed alpha
Helix 2
2
A
31 40Right-handed alpha
Helix 3
3
A
55 70Right-handed alpha
Helix 4
4
A
94 112Right-handed alpha
Helix 5
5
A
125 133Right-handed alpha
Helix 6
6
A
133 139Right-handed alpha
Helix 7
7
A
144 162Right-handed alpha
Helix 8
8
A
168 178Right-handed alpha
Helix 9
9
A
179 185Right-handed 310
Helix 10
10
A
192 211Right-handed alpha
Helix 11
11
A
212 219Right-handed 310
Helix 12
12
A
225 229Right-handed 310
Helix 13
13
B
11 16Right-handed alpha
Helix 14
14
B
31 40Right-handed alpha
Helix 15
15
B
55 70Right-handed alpha
Helix 16
16
B
94 112Right-handed alpha
Helix 17
17
B
125 133Right-handed alpha
Helix 18
18
B
133 139Right-handed alpha
Helix 19
19
B
144 163Right-handed alpha
Helix 20
20
B
168 174Right-handed alpha
Helix 21
21
B
179 185Right-handed 310
Helix 22
22
B
192 211Right-handed alpha
Helix 23
23
B
212 219Right-handed 310
Helix 24
24
B
225 229Right-handed 310
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There are 2 sheets in PDB entry 3MIL. Click on sheet of interest to get list of strands forming it: A, B,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
44 50first strand
Strand 2
A
4 10parallel
Strand 3
A
73 79parallel
Strand 4
A
115 119parallel
Strand 5
A
166 167parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
44 50first strand
Strand 2
B
4 10parallel
Strand 3
B
73 79parallel
Strand 4
B
115 119parallel
Strand 5
B
166 167parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il