Analysis of interatomic Contacts of Structural Units in PDB entry:
3MIX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3MIX entry

There is 1 chain in PDB entry 3MIX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 318ASP 676
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 3MIX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
318 327Right-handed alpha
Helix 2
2
A
331 336Right-handed alpha
Helix 3
3
A
337 339Right-handed 310
Helix 4
4
A
352 358Right-handed alpha
Helix 5
5
A
363 380Right-handed alpha
Helix 6
6
A
464 485Right-handed alpha
Helix 7
7
A
486 501Right-handed alpha
Helix 8
8
A
501 509Right-handed alpha
Helix 9
9
A
514 528Right-handed alpha
Helix 10
10
A
534 546Right-handed alpha
Helix 11
11
A
551 563Right-handed alpha
Helix 12
12
A
563 572Right-handed alpha
Helix 13
13
A
584 595Right-handed alpha
Helix 14
14
A
607 628Right-handed alpha
Helix 15
15
A
637 649Right-handed alpha
Helix 16
16
A
661 663Right-handed 310
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There are 4 sheets in PDB entry 3MIX. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
387 390first strand
Strand 2
A
344 348parallel
Strand 3
A
398 403anti-parallel
Strand 4
A
406 412anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
578 579first strand
Strand 2
A
669 670parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
582 583first strand
Strand 2
A
674 675parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
634 636first strand
Strand 2
A
657 659parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il