Analysis of interatomic Contacts of Structural Units in PDB entry:
3MJZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3MJZ entry

There are 12 chains in PDB entry 3MJZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 1PRO 131
B
 PRO 1PRO 131
C
 PRO 1PRO 131
D
 PRO 1PRO 131
E
 PRO 1PRO 131
F
 PRO 1ILE 130
G
 PRO 1PRO 131
H
 PRO 1PRO 131
I
 PRO 1PRO 131
J
 PRO 1PRO 131
K
 PRO 1ILE 130
L
 PRO 1PRO 131
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 70 helices in PDB entry 3MJZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 31Right-handed alpha
Helix 2
2
A
46 48Right-handed 310
Helix 3
3
A
77 93Right-handed alpha
Helix 4
4
A
98 100Right-handed 310
Helix 5
5
A
110 112Right-handed 310
Helix 6
6
A
121 126Right-handed alpha
Helix 7
7
B
12 32Right-handed alpha
Helix 8
8
B
46 48Right-handed 310
Helix 9
9
B
77 93Right-handed alpha
Helix 10
10
B
94 96Right-handed 310
Helix 11
11
B
98 100Right-handed 310
Helix 12
12
B
110 112Right-handed 310
Helix 13
13
B
121 126Right-handed alpha
Helix 14
14
C
12 32Right-handed alpha
Helix 15
15
C
77 93Right-handed alpha
Helix 16
16
C
98 100Right-handed 310
Helix 17
17
C
110 112Right-handed 310
Helix 18
18
D
12 32Right-handed alpha
Helix 19
19
D
46 48Right-handed 310
Helix 20
20
D
77 93Right-handed alpha
Helix 21
21
D
94 96Right-handed 310
Helix 22
22
D
98 100Right-handed 310
Helix 23
23
D
110 112Right-handed 310
Helix 24
24
D
121 126Right-handed alpha
Helix 25
25
E
12 32Right-handed alpha
Helix 26
26
E
46 48Right-handed 310
Helix 27
27
E
77 93Right-handed alpha
Helix 28
28
E
94 96Right-handed 310
Helix 29
29
E
98 100Right-handed 310
Helix 30
30
E
110 112Right-handed 310
Helix 31
31
E
121 126Right-handed alpha
Helix 32
32
F
12 32Right-handed alpha
Helix 33
33
F
46 48Right-handed 310
Helix 34
34
F
77 93Right-handed alpha
Helix 35
35
F
98 100Right-handed 310
Helix 36
36
F
110 112Right-handed 310
Helix 37
37
G
12 32Right-handed alpha
Helix 38
38
G
46 48Right-handed 310
Helix 39
39
G
77 96Right-handed alpha
Helix 40
40
G
98 100Right-handed 310
Helix 41
41
G
110 112Right-handed 310
Helix 42
42
G
121 126Right-handed alpha
Helix 43
43
H
12 31Right-handed alpha
Helix 44
44
H
46 48Right-handed 310
Helix 45
45
H
77 93Right-handed alpha
Helix 46
46
H
98 100Right-handed 310
Helix 47
47
H
110 112Right-handed 310
Helix 48
48
H
121 126Right-handed alpha
Helix 49
49
I
12 32Right-handed alpha
Helix 50
50
I
46 48Right-handed 310
Helix 51
51
I
77 93Right-handed alpha
Helix 52
52
I
94 96Right-handed 310
Helix 53
53
I
98 100Right-handed 310
Helix 54
54
I
110 112Right-handed 310
Helix 55
55
J
12 32Right-handed alpha
Helix 56
56
J
46 48Right-handed 310
Helix 57
57
J
77 93Right-handed alpha
Helix 58
58
J
98 100Right-handed 310
Helix 59
59
J
110 112Right-handed 310
Helix 60
60
K
12 32Right-handed alpha
Helix 61
61
K
46 48Right-handed 310
Helix 62
62
K
77 93Right-handed alpha
Helix 63
63
K
98 100Right-handed 310
Helix 64
64
K
110 112Right-handed 310
Helix 65
65
K
121 126Right-handed alpha
Helix 66
66
L
12 32Right-handed alpha
Helix 67
67
L
77 93Right-handed alpha
Helix 68
68
L
94 96Right-handed 310
Helix 69
69
L
98 100Right-handed 310
Helix 70
70
L
110 112Right-handed 310
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There are 12 sheets in PDB entry 3MJZ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
114 115first strand
Strand 2
A
102 109anti-parallel
Strand 3
A
66 73parallel
Strand 4
A
2 8anti-parallel
Strand 5
A
39 45parallel
Strand 6
C
50 52anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
50 52first strand
Strand 2
B
39 45anti-parallel
Strand 3
B
2 8parallel
Strand 4
B
66 73anti-parallel
Strand 5
B
102 109parallel
Strand 6
C
114 115anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
114 115first strand
Strand 2
C
102 109anti-parallel
Strand 3
C
66 73parallel
Strand 4
C
2 8anti-parallel
Strand 5
C
39 45parallel
Strand 6
B
50 52anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
114 115first strand
Strand 2
D
102 109anti-parallel
Strand 3
D
66 73parallel
Strand 4
D
2 8anti-parallel
Strand 5
D
39 45parallel
Strand 6
F
50 52anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
50 52first strand
Strand 2
E
39 45anti-parallel
Strand 3
E
2 8parallel
Strand 4
E
66 73anti-parallel
Strand 5
E
102 109parallel
Strand 6
F
114 115anti-parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
114 115first strand
Strand 2
F
102 109anti-parallel
Strand 3
F
66 73parallel
Strand 4
F
2 8anti-parallel
Strand 5
F
39 45parallel
Strand 6
E
50 52anti-parallel
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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
114 115first strand
Strand 2
G
102 109anti-parallel
Strand 3
G
66 73parallel
Strand 4
G
2 8anti-parallel
Strand 5
G
39 45parallel
Strand 6
I
50 52anti-parallel
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There are 6 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
50 52first strand
Strand 2
H
39 45anti-parallel
Strand 3
H
2 8parallel
Strand 4
H
66 73anti-parallel
Strand 5
H
102 109parallel
Strand 6
I
114 115anti-parallel
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There are 6 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
114 115first strand
Strand 2
I
102 109anti-parallel
Strand 3
I
66 73parallel
Strand 4
I
2 8anti-parallel
Strand 5
I
39 45parallel
Strand 6
H
50 52anti-parallel
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There are 6 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
114 115first strand
Strand 2
J
102 109anti-parallel
Strand 3
J
66 73parallel
Strand 4
J
2 8anti-parallel
Strand 5
J
39 45parallel
Strand 6
L
50 52anti-parallel
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There are 6 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
50 52first strand
Strand 2
K
39 45anti-parallel
Strand 3
K
2 8parallel
Strand 4
K
66 72anti-parallel
Strand 5
K
102 108parallel
Strand 6
L
114 115anti-parallel
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There are 6 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
J
114 115first strand
Strand 2
L
102 109anti-parallel
Strand 3
L
66 73parallel
Strand 4
L
2 8anti-parallel
Strand 5
L
39 45parallel
Strand 6
K
50 52anti-parallel
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