Analysis of interatomic Contacts of Structural Units in PDB entry:
3MK7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3MK7 entry

There are 4 chains in PDB entry 3MK7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 5ALA 470
B
 LYS 6LYS 202
C
 MET 1GLN 303
D
 ALA 8LEU 314
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are210 helices in PDB entry 3MK7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 41Right-handed alpha
Helix 2
2
A
42 46Right-handed 310
Helix 3
3
A
52 66Right-handed alpha
Helix 4
4
A
67 86Right-handed alpha
Helix 5
5
A
91 113Right-handed alpha
Helix 6
6
A
127 151Right-handed alpha
Helix 7
7
A
158 179Right-handed alpha
Helix 8
8
A
194 213Right-handed alpha
Helix 9
9
A
215 231Right-handed alpha
Helix 10
10
A
236 251Right-handed alpha
Helix 11
11
A
252 260Right-handed 310
Helix 12
12
A
265 279Right-handed alpha
Helix 13
13
A
279 292Right-handed alpha
Helix 14
14
A
293 295Right-handed 310
Helix 15
15
A
296 298Right-handed 310
Helix 16
16
A
299 304Right-handed alpha
Helix 17
17
A
304 328Right-handed alpha
Helix 18
18
A
329 337Right-handed alpha
Helix 19
19
A
339 353Right-handed alpha
Helix 20
20
A
353 370Right-handed alpha
Helix 21
21
A
378 412Right-handed alpha
Helix 22
22
A
422 430Right-handed alpha
Helix 23
23
A
430 461Right-handed alpha
Helix 24
24
B
10 22Right-handed alpha
Helix 25
25
B
23 30Right-handed alpha
Helix 26
26
B
30 36Right-handed alpha
Helix 27
27
B
50 64Right-handed alpha
Helix 28
28
B
65 68Right-handed 310
Helix 29
29
B
76 84Right-handed alpha
Helix 30
30
B
88 93Right-handed 310
Helix 31
31
B
117 127Right-handed alpha
Helix 32
32
B
127 132Right-handed alpha
Helix 33
33
B
141 146Right-handed alpha
Helix 34
34
B
152 163Right-handed alpha
Helix 35
35
B
168 173Right-handed alpha
Helix 36
36
B
175 180Right-handed alpha
Helix 37
37
B
183 193Right-handed alpha
Helix 38
38
B
198 202Right-handed 310
Helix 39
39
C
2 27Right-handed alpha
Helix 40
40
C
55 76Right-handed alpha
Helix 41
41
C
94 119Right-handed alpha
Helix 42
42
C
121 127Right-handed alpha
Helix 43
43
C
128 143Right-handed alpha
Helix 44
44
C
143 148Right-handed alpha
Helix 45
45
C
170 181Right-handed alpha
Helix 46
46
C
189 194Right-handed alpha
Helix 47
47
C
194 208Right-handed alpha
Helix 48
48
C
221 232Right-handed alpha
Helix 49
49
C
233 238Right-handed alpha
Helix 50
50
C
254 258Right-handed 310
Helix 51
51
C
263 274Right-handed alpha
Helix 52
52
C
286 302Right-handed alpha
Helix 53
53
D
11 41Right-handed alpha
Helix 54
54
D
42 46Right-handed 310
Helix 55
55
D
48 51Right-handed 310
Helix 56
56
D
52 66Right-handed alpha
Helix 57
57
D
67 86Right-handed alpha
Helix 58
58
D
91 113Right-handed alpha
Helix 59
59
D
127 151Right-handed alpha
Helix 60
60
D
158 179Right-handed alpha
Helix 61
61
D
194 213Right-handed alpha
Helix 62
62
D
215 231Right-handed alpha
Helix 63
63
D
236 254Right-handed alpha
Helix 64
64
D
255 260Right-handed 310
Helix 65
65
D
265 292Right-handed alpha
Helix 66
66
D
293 295Right-handed 310
Helix 67
67
D
296 298Right-handed 310
Helix 68
68
D
299 304Right-handed alpha
Helix 69
69
D
304 328Right-handed alpha
Helix 70
70
D
329 337Right-handed alpha
Helix 71
71
D
339 353Right-handed alpha
Helix 72
72
D
353 370Right-handed alpha
Helix 73
73
D
378 412Right-handed alpha
Helix 74
74
D
422 430Right-handed alpha
Helix 75
75
D
430 461Right-handed alpha
Helix 76
76
E
10 22Right-handed alpha
Helix 77
77
E
23 30Right-handed alpha
Helix 78
78
E
30 36Right-handed alpha
Helix 79
79
E
50 64Right-handed alpha
Helix 80
80
E
65 68Right-handed 310
Helix 81
81
E
76 84Right-handed alpha
Helix 82
82
E
88 93Right-handed 310
Helix 83
83
E
117 127Right-handed alpha
Helix 84
84
E
128 131Right-handed 310
Helix 85
85
E
141 146Right-handed alpha
Helix 86
86
E
152 163Right-handed alpha
Helix 87
87
E
168 173Right-handed alpha
Helix 88
88
E
175 180Right-handed alpha
Helix 89
89
E
183 193Right-handed alpha
Helix 90
90
F
2 27Right-handed alpha
Helix 91
91
F
55 76Right-handed alpha
Helix 92
92
F
94 119Right-handed alpha
Helix 93
93
F
121 127Right-handed alpha
Helix 94
94
F
128 143Right-handed alpha
Helix 95
95
F
143 148Right-handed alpha
Helix 96
96
F
170 181Right-handed alpha
Helix 97
97
F
189 194Right-handed alpha
Helix 98
98
F
194 208Right-handed alpha
Helix 99
99
F
221 232Right-handed alpha
Helix 100
100
F
233 238Right-handed alpha
Helix 101
101
F
254 258Right-handed 310
Helix 102
102
F
263 274Right-handed alpha
Helix 103
103
F
286 302Right-handed alpha
Helix 104
104
G
11 41Right-handed alpha
Helix 105
105
G
42 46Right-handed 310
Helix 106
106
G
52 66Right-handed alpha
Helix 107
107
G
67 86Right-handed alpha
Helix 108
108
G
91 113Right-handed alpha
Helix 109
109
G
127 151Right-handed alpha
Helix 110
110
G
158 179Right-handed alpha
Helix 111
111
G
194 213Right-handed alpha
Helix 112
112
G
215 231Right-handed alpha
Helix 113
113
G
236 251Right-handed alpha
Helix 114
114
G
252 258Right-handed 310
Helix 115
115
G
265 292Right-handed alpha
Helix 116
116
G
293 295Right-handed 310
Helix 117
117
G
296 298Right-handed 310
Helix 118
118
G
299 304Right-handed alpha
Helix 119
119
G
304 328Right-handed alpha
Helix 120
120
G
329 337Right-handed alpha
Helix 121
121
G
339 353Right-handed alpha
Helix 122
122
G
353 370Right-handed alpha
Helix 123
123
G
378 412Right-handed alpha
Helix 124
124
G
422 430Right-handed alpha
Helix 125
125
G
430 461Right-handed alpha
Helix 126
126
H
10 22Right-handed alpha
Helix 127
127
H
23 30Right-handed alpha
Helix 128
128
H
30 36Right-handed alpha
Helix 129
129
H
50 63Right-handed alpha
Helix 130
130
H
64 68Right-handed 310
Helix 131
131
H
76 84Right-handed alpha
Helix 132
132
H
88 93Right-handed 310
Helix 133
133
H
117 127Right-handed alpha
Helix 134
134
H
128 131Right-handed 310
Helix 135
135
H
141 146Right-handed alpha
Helix 136
136
H
152 163Right-handed alpha
Helix 137
137
H
168 173Right-handed alpha
Helix 138
138
H
175 180Right-handed alpha
Helix 139
139
H
183 193Right-handed alpha
Helix 140
140
H
198 202Right-handed 310
Helix 141
141
I
2 27Right-handed alpha
Helix 142
142
I
55 76Right-handed alpha
Helix 143
143
I
94 119Right-handed alpha
Helix 144
144
I
121 127Right-handed alpha
Helix 145
145
I
128 143Right-handed alpha
Helix 146
146
I
143 148Right-handed alpha
Helix 147
147
I
170 181Right-handed alpha
Helix 148
148
I
189 194Right-handed alpha
Helix 149
149
I
194 208Right-handed alpha
Helix 150
150
I
221 232Right-handed alpha
Helix 151
151
I
233 238Right-handed alpha
Helix 152
152
I
254 258Right-handed 310
Helix 153
153
I
263 274Right-handed alpha
Helix 154
154
I
286 302Right-handed alpha
Helix 155
155
K
11 41Right-handed alpha
Helix 156
156
K
42 46Right-handed 310
Helix 157
157
K
52 66Right-handed alpha
Helix 158
158
K
67 86Right-handed alpha
Helix 159
159
K
91 113Right-handed alpha
Helix 160
160
K
127 151Right-handed alpha
Helix 161
161
K
158 179Right-handed alpha
Helix 162
162
K
194 213Right-handed alpha
Helix 163
163
K
215 231Right-handed alpha
Helix 164
164
K
236 254Right-handed alpha
Helix 165
165
K
255 258Right-handed 310
Helix 166
166
K
265 279Right-handed alpha
Helix 167
167
K
279 292Right-handed alpha
Helix 168
168
K
293 295Right-handed 310
Helix 169
169
K
296 298Right-handed 310
Helix 170
170
K
299 304Right-handed alpha
Helix 171
171
K
304 328Right-handed alpha
Helix 172
172
K
329 337Right-handed alpha
Helix 173
173
K
339 353Right-handed alpha
Helix 174
174
K
353 370Right-handed alpha
Helix 175
175
K
378 412Right-handed alpha
Helix 176
176
K
422 430Right-handed alpha
Helix 177
177
K
430 461Right-handed alpha
Helix 178
178
L
10 22Right-handed alpha
Helix 179
179
L
23 30Right-handed alpha
Helix 180
180
L
30 36Right-handed alpha
Helix 181
181
L
50 64Right-handed alpha
Helix 182
182
L
65 68Right-handed 310
Helix 183
183
L
76 84Right-handed alpha
Helix 184
184
L
88 93Right-handed 310
Helix 185
185
L
117 127Right-handed alpha
Helix 186
186
L
127 132Right-handed alpha
Helix 187
187
L
141 146Right-handed alpha
Helix 188
188
L
152 163Right-handed alpha
Helix 189
189
L
168 173Right-handed alpha
Helix 190
190
L
183 193Right-handed alpha
Helix 191
191
M
2 27Right-handed alpha
Helix 192
192
M
55 76Right-handed alpha
Helix 193
193
M
94 119Right-handed alpha
Helix 194
194
M
121 127Right-handed alpha
Helix 195
195
M
128 143Right-handed alpha
Helix 196
196
M
143 148Right-handed alpha
Helix 197
197
M
170 181Right-handed alpha
Helix 198
198
M
189 194Right-handed alpha
Helix 199
199
M
194 208Right-handed alpha
Helix 200
200
M
221 232Right-handed alpha
Helix 201
201
M
233 238Right-handed alpha
Helix 202
202
M
254 258Right-handed 310
Helix 203
203
M
263 274Right-handed alpha
Helix 204
204
M
286 302Right-handed alpha
Helix 205
205
U
704 724Right-handed alpha
Helix 206
206
U
724 729Right-handed alpha
Helix 207
207
X
704 721Right-handed alpha
Helix 208
208
Y
704 724Right-handed alpha
Helix 209
209
Z
706 718Right-handed alpha
Helix 210
210
Z
722 730Right-handed alpha
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There are 8 sheets in PDB entry 3MK7. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
181 185first strand
Strand 2
A
188 191anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
182 183first strand
Strand 2
C
278 279anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
181 185first strand
Strand 2
D
188 191anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
182 183first strand
Strand 2
F
278 279anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
181 185first strand
Strand 2
G
188 191anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
182 183first strand
Strand 2
I
278 279anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
181 185first strand
Strand 2
K
188 191anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
182 183first strand
Strand 2
M
278 279anti-parallel
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