Analysis of interatomic Contacts of Structural Units in PDB entry:
3MKW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3MKW entry

There are 4 chains in PDB entry 3MKW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
U
 C 1 G 18
T
 C 1 G 18
B
 PRO 157SER 271
P
 PRO 157SER 271
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 3MKW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
B
159 173Right-handed alpha
Helix 2
2
B
178 187Right-handed alpha
Helix 3
3
B
189 202Right-handed alpha
Helix 4
4
B
203 209Right-handed alpha
Helix 5
5
B
212 216Right-handed 310
Helix 6
6
B
217 228Right-handed alpha
Helix 7
7
B
231 248Right-handed alpha
Helix 8
8
B
253 264Right-handed alpha
Helix 9
9
B
265 270Right-handed 310
Helix 10
10
P
159 173Right-handed alpha
Helix 11
11
P
178 187Right-handed alpha
Helix 12
12
P
189 201Right-handed alpha
Helix 13
13
P
203 209Right-handed alpha
Helix 14
14
P
212 216Right-handed 310
Helix 15
15
P
217 229Right-handed alpha
Helix 16
16
P
231 248Right-handed alpha
Helix 17
17
P
254 264Right-handed alpha
Helix 18
18
P
266 271Right-handed alpha
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There are no sheets in PDB entry 3MKW
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il