Analysis of interatomic Contacts of Structural Units in PDB entry:
3MLB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3MLB entry

There are 2 chains in PDB entry 3MLB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1SER 189
B
 MET 1SER 189
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 3MLB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
15 30Right-handed alpha
Helix 2
2
A
52 65Right-handed alpha
Helix 3
3
A
84 96Right-handed alpha
Helix 4
4
A
106 116Right-handed 310
Helix 5
5
A
118 124Right-handed alpha
Helix 6
6
A
155 165Right-handed alpha
Helix 7
7
A
174 185Right-handed alpha
Helix 8
8
B
15 29Right-handed alpha
Helix 9
9
B
52 65Right-handed alpha
Helix 10
10
B
75 79Right-handed 310
Helix 11
11
B
84 96Right-handed alpha
Helix 12
12
B
108 116Right-handed 310
Helix 13
13
B
118 124Right-handed alpha
Helix 14
14
B
155 165Right-handed alpha
Helix 15
15
B
174 185Right-handed alpha
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There are 2 sheets in PDB entry 3MLB. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
70 72first strand
Strand 2
A
33 38parallel
Strand 3
A
2 9parallel
Strand 4
A
99 105parallel
Strand 5
A
127 132parallel
Strand 6
A
145 148parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
70 72first strand
Strand 2
B
33 38parallel
Strand 3
B
2 9parallel
Strand 4
B
99 106parallel
Strand 5
B
127 132parallel
Strand 6
B
145 148parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il