Analysis of interatomic Contacts of Structural Units in PDB entry:
3MLN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3MLN entry

There are 5 chains in PDB entry 3MLN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 35HIS 240
B
 GLY 35GLN 247
E
 VAL 27HIS 235
C
 C 1 G 22
D
 C 1 G 22
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 3MLN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
39 45Right-handed alpha
Helix 2
2
A
94 102Right-handed 310
Helix 3
3
A
147 151Right-handed 310
Helix 4
4
A
156 161Right-handed alpha
Helix 5
5
A
161 166Right-handed alpha
Helix 6
6
A
170 176Right-handed alpha
Helix 7
7
B
39 44Right-handed alpha
Helix 8
8
B
94 102Right-handed 310
Helix 9
9
B
147 151Right-handed 310
Helix 10
10
B
157 160Right-handed 310
Helix 11
11
B
161 166Right-handed alpha
Helix 12
12
B
170 176Right-handed alpha
Helix 13
13
B
239 243Right-handed 310
Helix 14
14
E
39 44Right-handed alpha
Helix 15
15
E
196 199Right-handed 310
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There are 14 sheets in PDB entry 3MLN. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 38first strand
Strand 2
A
121 132parallel
Strand 3
A
108 115anti-parallel
Strand 4
A
83 92anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
36 38first strand
Strand 2
A
121 132parallel
Strand 3
A
211 216anti-parallel
Strand 4
A
225 228anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 56first strand
Strand 2
A
67 76anti-parallel
Strand 3
A
187 194anti-parallel
Strand 4
A
154 155anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
49 56first strand
Strand 2
A
67 76anti-parallel
Strand 3
A
187 194anti-parallel
Strand 4
A
181 183anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 63first strand
Strand 2
A
233 235parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
37 38first strand
Strand 2
B
121 132parallel
Strand 3
B
108 116anti-parallel
Strand 4
B
82 92anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
37 38first strand
Strand 2
B
121 132parallel
Strand 3
B
211 216anti-parallel
Strand 4
B
227 228anti-parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
49 56first strand
Strand 2
B
68 76anti-parallel
Strand 3
B
187 194anti-parallel
Strand 4
B
154 155anti-parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
49 56first strand
Strand 2
B
68 76anti-parallel
Strand 3
B
187 194anti-parallel
Strand 4
B
181 183anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
61 63first strand
Strand 2
B
233 235parallel
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There are 5 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
36 38first strand
Strand 2
E
121 132parallel
Strand 3
E
209 216anti-parallel
Strand 4
E
107 115first strand
Strand 5
E
83 92anti-parallel
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There are 5 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
61 62first strand
Strand 2
E
232 234parallel
Strand 3
E
209 216anti-parallel
Strand 4
E
121 132anti-parallel
Strand 5
E
225 228first strand
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There are 4 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
49 56first strand
Strand 2
E
67 76anti-parallel
Strand 3
E
187 194anti-parallel
Strand 4
E
154 156anti-parallel
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There are 4 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
49 56first strand
Strand 2
E
67 76anti-parallel
Strand 3
E
187 194anti-parallel
Strand 4
E
181 183anti-parallel
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