Analysis of interatomic Contacts of Structural Units in PDB entry:
3MN1

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3MN1 entry

There are 12 chains in PDB entry 3MN1 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 0	HIS 182
B	SER 7	GLU 180
C	SER 7	GLU 180
D	SER 7	HIS 182
E	SER 7	GLU 180
F	SER 7	HIS 182
G	GLN 8	GLU 180
H	GLN 8	GLU 180
I	SER 7	GLU 180
J	GLN 8	HIS 183
K	SER 7	HIS 182
L	GLN 8	GLU 180

There are123 helices in PDB entry 3MN1. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	0	5	Right-handed alpha
Helix 2	2	A	7	15	Right-handed alpha
Helix 3	3	A	47	59	Right-handed alpha
Helix 4	4	A	71	82	Right-handed alpha
Helix 5	5	A	92	105	Right-handed alpha
Helix 6	6	A	107	109	Right-handed 310
Helix 7	7	A	117	119	Right-handed 310
Helix 8	8	A	120	127	Right-handed alpha
Helix 9	9	A	137	143	Right-handed alpha
Helix 10	10	A	155	168	Right-handed alpha
Helix 11	11	A	170	177	Right-handed alpha
Helix 12	12	B	7	15	Right-handed alpha
Helix 13	13	B	47	59	Right-handed alpha
Helix 14	14	B	71	82	Right-handed alpha
Helix 15	15	B	92	105	Right-handed alpha
Helix 16	16	B	107	109	Right-handed 310
Helix 17	17	B	117	119	Right-handed 310
Helix 18	18	B	120	127	Right-handed alpha
Helix 19	19	B	137	144	Right-handed alpha
Helix 20	20	B	155	168	Right-handed alpha
Helix 21	21	B	170	177	Right-handed alpha
Helix 22	22	C	7	15	Right-handed alpha
Helix 23	23	C	47	59	Right-handed alpha
Helix 24	24	C	71	82	Right-handed alpha
Helix 25	25	C	92	105	Right-handed alpha
Helix 26	26	C	107	109	Right-handed 310
Helix 27	27	C	117	119	Right-handed 310
Helix 28	28	C	120	127	Right-handed alpha
Helix 29	29	C	137	144	Right-handed alpha
Helix 30	30	C	155	168	Right-handed alpha
Helix 31	31	C	170	177	Right-handed alpha
Helix 32	32	D	7	15	Right-handed alpha
Helix 33	33	D	47	59	Right-handed alpha
Helix 34	34	D	71	82	Right-handed alpha
Helix 35	35	D	92	105	Right-handed alpha
Helix 36	36	D	107	109	Right-handed 310
Helix 37	37	D	117	119	Right-handed 310
Helix 38	38	D	120	127	Right-handed alpha
Helix 39	39	D	137	144	Right-handed alpha
Helix 40	40	D	155	168	Right-handed alpha
Helix 41	41	D	170	177	Right-handed alpha
Helix 42	42	D	178	180	Right-handed 310
Helix 43	43	E	7	15	Right-handed alpha
Helix 44	44	E	47	59	Right-handed alpha
Helix 45	45	E	71	82	Right-handed alpha
Helix 46	46	E	92	105	Right-handed alpha
Helix 47	47	E	107	109	Right-handed 310
Helix 48	48	E	117	119	Right-handed 310
Helix 49	49	E	120	125	Right-handed alpha
Helix 50	50	E	137	143	Right-handed alpha
Helix 51	51	E	155	168	Right-handed alpha
Helix 52	52	E	170	177	Right-handed alpha
Helix 53	53	F	7	15	Right-handed alpha
Helix 54	54	F	47	59	Right-handed alpha
Helix 55	55	F	71	82	Right-handed alpha
Helix 56	56	F	92	105	Right-handed alpha
Helix 57	57	F	107	109	Right-handed 310
Helix 58	58	F	117	119	Right-handed 310
Helix 59	59	F	120	127	Right-handed alpha
Helix 60	60	F	137	144	Right-handed alpha
Helix 61	61	F	155	168	Right-handed alpha
Helix 62	62	F	170	177	Right-handed alpha
Helix 63	63	G	8	15	Right-handed alpha
Helix 64	64	G	47	59	Right-handed alpha
Helix 65	65	G	71	82	Right-handed alpha
Helix 66	66	G	92	105	Right-handed alpha
Helix 67	67	G	107	109	Right-handed 310
Helix 68	68	G	117	119	Right-handed 310
Helix 69	69	G	120	125	Right-handed alpha
Helix 70	70	G	137	144	Right-handed alpha
Helix 71	71	G	155	168	Right-handed alpha
Helix 72	72	G	170	177	Right-handed alpha
Helix 73	73	H	8	16	Right-handed alpha
Helix 74	74	H	47	59	Right-handed alpha
Helix 75	75	H	71	82	Right-handed alpha
Helix 76	76	H	92	105	Right-handed alpha
Helix 77	77	H	107	109	Right-handed 310
Helix 78	78	H	117	119	Right-handed 310
Helix 79	79	H	120	125	Right-handed alpha
Helix 80	80	H	137	144	Right-handed alpha
Helix 81	81	H	155	168	Right-handed alpha
Helix 82	82	H	170	177	Right-handed alpha
Helix 83	83	I	7	15	Right-handed alpha
Helix 84	84	I	47	59	Right-handed alpha
Helix 85	85	I	71	82	Right-handed alpha
Helix 86	86	I	92	105	Right-handed alpha
Helix 87	87	I	107	109	Right-handed 310
Helix 88	88	I	117	119	Right-handed 310
Helix 89	89	I	120	125	Right-handed alpha
Helix 90	90	I	137	144	Right-handed alpha
Helix 91	91	I	155	168	Right-handed alpha
Helix 92	92	I	170	177	Right-handed alpha
Helix 93	93	J	8	15	Right-handed alpha
Helix 94	94	J	47	59	Right-handed alpha
Helix 95	95	J	71	82	Right-handed alpha
Helix 96	96	J	92	105	Right-handed alpha
Helix 97	97	J	107	109	Right-handed 310
Helix 98	98	J	117	119	Right-handed 310
Helix 99	99	J	120	127	Right-handed alpha
Helix 100	100	J	137	143	Right-handed alpha
Helix 101	101	J	155	168	Right-handed alpha
Helix 102	102	J	170	177	Right-handed alpha
Helix 103	103	K	7	15	Right-handed alpha
Helix 104	104	K	47	59	Right-handed alpha
Helix 105	105	K	71	82	Right-handed alpha
Helix 106	106	K	92	105	Right-handed alpha
Helix 107	107	K	107	109	Right-handed 310
Helix 108	108	K	117	119	Right-handed 310
Helix 109	109	K	120	127	Right-handed alpha
Helix 110	110	K	137	144	Right-handed alpha
Helix 111	111	K	155	168	Right-handed alpha
Helix 112	112	K	170	177	Right-handed alpha
Helix 113	113	K	178	180	Right-handed 310
Helix 114	114	L	8	16	Right-handed alpha
Helix 115	115	L	47	59	Right-handed alpha
Helix 116	116	L	71	82	Right-handed alpha
Helix 117	117	L	92	105	Right-handed alpha
Helix 118	118	L	107	109	Right-handed 310
Helix 119	119	L	117	119	Right-handed 310
Helix 120	120	L	120	125	Right-handed alpha
Helix 121	121	L	137	144	Right-handed alpha
Helix 122	122	L	155	168	Right-handed alpha
Helix 123	123	L	170	177	Right-handed alpha

There are 15 sheets in PDB entry 3MN1. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	85	87	first strand
Strand 2	A	62	66	parallel
Strand 3	A	19	22	parallel
Strand 4	A	111	115	parallel
Strand 5	A	129	132	parallel
Strand 6	A	146	147	parallel

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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	32	36	first strand
Strand 2	A	41	46	anti-parallel
Strand 3	C	32	36	anti-parallel
Strand 4	C	41	46	anti-parallel
Strand 5	D	32	36	anti-parallel
Strand 6	D	41	46	anti-parallel
Strand 7	H	32	36	anti-parallel
Strand 8	H	41	46	anti-parallel
Strand 9	A	32	36	anti-parallel

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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	85	87	first strand
Strand 2	B	62	66	parallel
Strand 3	B	19	22	parallel
Strand 4	B	111	115	parallel
Strand 5	B	129	132	parallel
Strand 6	B	146	147	parallel

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There are 9 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	32	36	first strand
Strand 2	B	41	46	anti-parallel
Strand 3	K	32	36	anti-parallel
Strand 4	K	41	46	anti-parallel
Strand 5	L	32	36	anti-parallel
Strand 6	L	41	46	anti-parallel
Strand 7	J	32	36	anti-parallel
Strand 8	J	41	46	anti-parallel
Strand 9	B	32	36	anti-parallel

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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	85	87	first strand
Strand 2	C	62	66	parallel
Strand 3	C	19	22	parallel
Strand 4	C	111	115	parallel
Strand 5	C	129	132	parallel
Strand 6	C	146	147	parallel

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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	85	87	first strand
Strand 2	D	62	66	parallel
Strand 3	D	19	22	parallel
Strand 4	D	111	115	parallel
Strand 5	D	129	132	parallel
Strand 6	D	146	147	parallel

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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	85	87	first strand
Strand 2	E	62	66	parallel
Strand 3	E	19	22	parallel
Strand 4	E	111	115	parallel
Strand 5	E	129	132	parallel
Strand 6	E	146	147	parallel

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There are 9 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	32	36	first strand
Strand 2	E	41	46	anti-parallel
Strand 3	I	32	36	anti-parallel
Strand 4	I	41	46	anti-parallel
Strand 5	G	32	36	anti-parallel
Strand 6	G	41	46	anti-parallel
Strand 7	F	32	36	anti-parallel
Strand 8	F	41	46	anti-parallel
Strand 9	E	32	36	anti-parallel

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There are 6 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	85	87	first strand
Strand 2	F	62	66	parallel
Strand 3	F	19	22	parallel
Strand 4	F	111	115	parallel
Strand 5	F	129	132	parallel
Strand 6	F	146	147	parallel

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There are 6 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	85	87	first strand
Strand 2	G	62	66	parallel
Strand 3	G	19	22	parallel
Strand 4	G	111	115	parallel
Strand 5	G	129	132	parallel
Strand 6	G	146	147	parallel

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There are 6 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	85	87	first strand
Strand 2	H	62	66	parallel
Strand 3	H	19	22	parallel
Strand 4	H	111	115	parallel
Strand 5	H	129	132	parallel
Strand 6	H	146	147	parallel

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There are 6 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	85	87	first strand
Strand 2	I	62	66	parallel
Strand 3	I	19	22	parallel
Strand 4	I	111	115	parallel
Strand 5	I	129	132	parallel
Strand 6	I	146	147	parallel

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There are 6 strands in M sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	85	87	first strand
Strand 2	J	62	66	parallel
Strand 3	J	19	22	parallel
Strand 4	J	111	115	parallel
Strand 5	J	129	132	parallel
Strand 6	J	146	147	parallel

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There are 6 strands in N sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	85	87	first strand
Strand 2	K	62	66	parallel
Strand 3	K	19	22	parallel
Strand 4	K	111	115	parallel
Strand 5	K	129	132	parallel
Strand 6	K	146	147	parallel

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There are 6 strands in O sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	85	87	first strand
Strand 2	L	62	66	parallel
Strand 3	L	19	22	parallel
Strand 4	L	111	115	parallel
Strand 5	L	129	132	parallel
Strand 6	L	146	147	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3MN1

Analysis of interatomic Contacts of Structural Units in PDB entry:
3MN1