Analysis of interatomic Contacts of Structural Units in PDB entry:
3MN6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3MN6 entry

There are 6 chains in PDB entry 3MN6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 5PHE 375
F
 VAL 5PHE 375
K
 VAL 5PHE 375
X
 UNK 1UNK 19
Y
 UNK 1UNK 19
Z
 UNK 1UNK 19
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 65 helices in PDB entry 3MN6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
55 61Right-handed alpha
Helix 2
2
A
78 92Right-handed alpha
Helix 3
3
A
97 101Right-handed 310
Helix 4
4
A
112 126Right-handed alpha
Helix 5
5
A
137 145Right-handed alpha
Helix 6
6
A
172 175Right-handed 310
Helix 7
7
A
181 195Right-handed alpha
Helix 8
8
A
202 217Right-handed alpha
Helix 9
9
A
222 233Right-handed alpha
Helix 10
10
A
252 260Right-handed alpha
Helix 11
11
A
261 262Right-handed 310
Helix 12
12
A
263 268Right-handed 310
Helix 13
13
A
273 284Right-handed alpha
Helix 14
14
A
285 288Right-handed 310
Helix 15
15
A
289 295Right-handed alpha
Helix 16
16
A
301 305Right-handed 310
Helix 17
17
A
308 321Right-handed alpha
Helix 18
18
A
337 347Right-handed alpha
Helix 19
19
A
348 353Right-handed 310
Helix 20
20
A
359 366Right-handed alpha
Helix 21
21
A
369 374Right-handed alpha
Helix 22
22
F
55 61Right-handed alpha
Helix 23
23
F
78 92Right-handed alpha
Helix 24
24
F
97 101Right-handed 310
Helix 25
25
F
112 126Right-handed alpha
Helix 26
26
F
137 145Right-handed alpha
Helix 27
27
F
172 175Right-handed 310
Helix 28
28
F
181 195Right-handed alpha
Helix 29
29
F
202 217Right-handed alpha
Helix 30
30
F
222 233Right-handed alpha
Helix 31
31
F
252 260Right-handed alpha
Helix 32
32
F
261 262Right-handed 310
Helix 33
33
F
263 268Right-handed 310
Helix 34
34
F
273 284Right-handed alpha
Helix 35
35
F
289 295Right-handed alpha
Helix 36
36
F
301 305Right-handed 310
Helix 37
37
F
308 321Right-handed alpha
Helix 38
38
F
337 347Right-handed alpha
Helix 39
39
F
348 353Right-handed 310
Helix 40
40
F
359 366Right-handed alpha
Helix 41
41
F
369 374Right-handed alpha
Helix 42
42
K
55 61Right-handed alpha
Helix 43
43
K
78 92Right-handed alpha
Helix 44
44
K
97 101Right-handed 310
Helix 45
45
K
112 126Right-handed alpha
Helix 46
46
K
137 145Right-handed alpha
Helix 47
47
K
172 175Right-handed 310
Helix 48
48
K
181 195Right-handed alpha
Helix 49
49
K
202 217Right-handed alpha
Helix 50
50
K
222 233Right-handed alpha
Helix 51
51
K
252 260Right-handed alpha
Helix 52
52
K
261 262Right-handed 310
Helix 53
53
K
263 268Right-handed 310
Helix 54
54
K
273 284Right-handed alpha
Helix 55
55
K
285 288Right-handed 310
Helix 56
56
K
289 295Right-handed alpha
Helix 57
57
K
301 305Right-handed 310
Helix 58
58
K
308 321Right-handed alpha
Helix 59
59
K
337 349Right-handed alpha
Helix 60
60
K
350 353Right-handed 310
Helix 61
61
K
359 366Right-handed alpha
Helix 62
62
K
369 374Right-handed alpha
Helix 63
63
X
3 13Right-handed alpha
Helix 64
64
Y
3 13Right-handed alpha
Helix 65
65
Z
2 13Right-handed alpha
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There are 18 sheets in PDB entry 3MN6. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
29 32first strand
Strand 2
A
16 21anti-parallel
Strand 3
A
8 12anti-parallel
Strand 4
A
103 107parallel
Strand 5
A
131 136parallel
Strand 6
A
357 358anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
53 54first strand
Strand 2
A
35 38anti-parallel
Strand 3
A
65 68anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
71 72first strand
Strand 2
A
75 76anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
169 170first strand
Strand 2
A
160 166anti-parallel
Strand 3
A
176 178anti-parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
169 170first strand
Strand 2
A
160 166anti-parallel
Strand 3
A
150 155anti-parallel
Strand 4
A
297 300parallel
Strand 5
A
329 330parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
238 241first strand
Strand 2
A
247 250anti-parallel
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There are 6 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
29 32first strand
Strand 2
F
16 21anti-parallel
Strand 3
F
8 12anti-parallel
Strand 4
F
103 107parallel
Strand 5
F
131 136parallel
Strand 6
F
357 358anti-parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
53 54first strand
Strand 2
F
35 38anti-parallel
Strand 3
F
65 68anti-parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
71 72first strand
Strand 2
F
75 76anti-parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
169 170first strand
Strand 2
F
160 166anti-parallel
Strand 3
F
176 178anti-parallel
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There are 5 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
169 170first strand
Strand 2
F
160 166anti-parallel
Strand 3
F
150 155anti-parallel
Strand 4
F
297 300parallel
Strand 5
F
329 330parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
238 241first strand
Strand 2
F
247 250anti-parallel
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There are 6 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
29 32first strand
Strand 2
K
16 21anti-parallel
Strand 3
K
8 12anti-parallel
Strand 4
K
103 107parallel
Strand 5
K
131 136parallel
Strand 6
K
357 358anti-parallel
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There are 3 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
53 54first strand
Strand 2
K
35 38anti-parallel
Strand 3
K
65 68anti-parallel
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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
71 72first strand
Strand 2
K
75 76anti-parallel
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There are 3 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
169 170first strand
Strand 2
K
160 166anti-parallel
Strand 3
K
176 178anti-parallel
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There are 5 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
169 170first strand
Strand 2
K
160 166anti-parallel
Strand 3
K
150 155anti-parallel
Strand 4
K
297 300parallel
Strand 5
K
329 330parallel
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There are 2 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
238 241first strand
Strand 2
K
247 250anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il