Analysis of interatomic Contacts of Structural Units in PDB entry:
3MN8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3MN8 entry

There are 4 chains in PDB entry 3MN8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 29VAL 419
B
 ILE 28GLU 420
C
 GLU 30VAL 419
D
 THR 27VAL 140
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 60 helices in PDB entry 3MN8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
32 36Right-handed 310
Helix 2
2
A
42 57Right-handed alpha
Helix 3
3
A
105 122Right-handed alpha
Helix 4
4
A
125 135Right-handed alpha
Helix 5
5
A
144 150Right-handed alpha
Helix 6
6
A
159 163Right-handed 310
Helix 7
7
A
172 176Right-handed 310
Helix 8
8
A
195 206Right-handed alpha
Helix 9
9
A
244 258Right-handed alpha
Helix 10
10
A
266 270Right-handed 310
Helix 11
11
A
272 274Right-handed 310
Helix 12
12
A
279 283Right-handed alpha
Helix 13
13
A
288 297Right-handed alpha
Helix 14
14
A
313 315Right-handed 310
Helix 15
15
A
316 334Right-handed alpha
Helix 16
16
A
335 337Right-handed 310
Helix 17
17
B
42 57Right-handed alpha
Helix 18
18
B
105 123Right-handed alpha
Helix 19
19
B
125 135Right-handed alpha
Helix 20
20
B
144 151Right-handed alpha
Helix 21
21
B
159 163Right-handed 310
Helix 22
22
B
172 176Right-handed 310
Helix 23
23
B
195 206Right-handed alpha
Helix 24
24
B
244 258Right-handed alpha
Helix 25
25
B
272 274Right-handed 310
Helix 26
26
B
279 283Right-handed alpha
Helix 27
27
B
288 297Right-handed alpha
Helix 28
28
B
313 315Right-handed 310
Helix 29
29
B
316 334Right-handed alpha
Helix 30
30
B
335 337Right-handed 310
Helix 31
31
C
32 36Right-handed 310
Helix 32
32
C
42 57Right-handed alpha
Helix 33
33
C
105 123Right-handed alpha
Helix 34
34
C
125 135Right-handed alpha
Helix 35
35
C
144 151Right-handed alpha
Helix 36
36
C
159 163Right-handed 310
Helix 37
37
C
172 176Right-handed 310
Helix 38
38
C
195 206Right-handed alpha
Helix 39
39
C
244 258Right-handed alpha
Helix 40
40
C
272 274Right-handed 310
Helix 41
41
C
279 283Right-handed alpha
Helix 42
42
C
288 297Right-handed alpha
Helix 43
43
C
313 315Right-handed 310
Helix 44
44
C
316 333Right-handed alpha
Helix 45
45
C
334 337Right-handed 310
Helix 46
46
D
32 36Right-handed 310
Helix 47
47
D
42 57Right-handed alpha
Helix 48
48
D
105 122Right-handed alpha
Helix 49
49
D
125 135Right-handed alpha
Helix 50
50
D
144 151Right-handed alpha
Helix 51
51
D
172 176Right-handed 310
Helix 52
52
D
195 206Right-handed alpha
Helix 53
53
D
244 258Right-handed alpha
Helix 54
54
D
261 265Right-handed 310
Helix 55
55
D
272 274Right-handed 310
Helix 56
56
D
279 283Right-handed alpha
Helix 57
57
D
288 297Right-handed alpha
Helix 58
58
D
313 315Right-handed 310
Helix 59
59
D
316 334Right-handed alpha
Helix 60
60
D
335 337Right-handed 310
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There are 16 sheets in PDB entry 3MN8. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
61 68first strand
Strand 2
A
74 80anti-parallel
Strand 3
A
136 140anti-parallel
Strand 4
A
93 97parallel
Strand 5
A
212 217parallel
Strand 6
A
300 305parallel
Strand 7
A
222 225anti-parallel
Strand 8
A
276 278parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
373 376first strand
Strand 2
A
339 344anti-parallel
Strand 3
A
410 411parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
373 376first strand
Strand 2
A
339 344anti-parallel
Strand 3
A
414 415parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
366 367first strand
Strand 2
A
355 358anti-parallel
Strand 3
A
381 388anti-parallel
Strand 4
A
398 402anti-parallel
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There are 8 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
61 68first strand
Strand 2
B
74 80anti-parallel
Strand 3
B
136 140anti-parallel
Strand 4
B
93 97parallel
Strand 5
B
212 217parallel
Strand 6
B
300 305parallel
Strand 7
B
222 225anti-parallel
Strand 8
B
276 278parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
373 376first strand
Strand 2
B
339 344anti-parallel
Strand 3
B
410 411parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
373 376first strand
Strand 2
B
339 344anti-parallel
Strand 3
B
414 415parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
366 367first strand
Strand 2
B
355 358anti-parallel
Strand 3
B
381 388anti-parallel
Strand 4
B
398 402anti-parallel
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There are 8 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
61 68first strand
Strand 2
C
74 80anti-parallel
Strand 3
C
136 140anti-parallel
Strand 4
C
93 98parallel
Strand 5
C
212 217parallel
Strand 6
C
300 305parallel
Strand 7
C
222 225anti-parallel
Strand 8
C
276 278parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
373 376first strand
Strand 2
C
339 344anti-parallel
Strand 3
C
410 411parallel
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There are 3 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
373 376first strand
Strand 2
C
339 344anti-parallel
Strand 3
C
414 415parallel
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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
366 367first strand
Strand 2
C
355 358anti-parallel
Strand 3
C
381 388anti-parallel
Strand 4
C
398 402anti-parallel
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There are 8 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
61 68first strand
Strand 2
D
74 80anti-parallel
Strand 3
D
136 140anti-parallel
Strand 4
D
93 98parallel
Strand 5
D
212 217parallel
Strand 6
D
300 305parallel
Strand 7
D
222 225anti-parallel
Strand 8
D
276 278parallel
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There are 3 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
373 376first strand
Strand 2
D
339 344anti-parallel
Strand 3
D
410 411parallel
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There are 3 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
373 376first strand
Strand 2
D
339 344anti-parallel
Strand 3
D
414 415parallel
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There are 4 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
366 367first strand
Strand 2
D
355 358anti-parallel
Strand 3
D
381 388anti-parallel
Strand 4
D
398 402anti-parallel
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