Analysis of interatomic Contacts of Structural Units in PDB entry:
3MO4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3MO4 entry

There are 2 chains in PDB entry 3MO4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 7ILE 478
B
 GLY 8ILE 478
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 36 helices in PDB entry 3MO4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
8 15Right-handed alpha
Helix 2
2
A
20 28Right-handed alpha
Helix 3
3
A
38 44Right-handed alpha
Helix 4
4
A
53 57Right-handed 310
Helix 5
5
A
63 74Right-handed alpha
Helix 6
6
A
100 104Right-handed 310
Helix 7
7
A
105 110Right-handed 310
Helix 8
8
A
112 124Right-handed alpha
Helix 9
9
A
145 163Right-handed alpha
Helix 10
10
A
187 199Right-handed alpha
Helix 11
11
A
232 236Right-handed 310
Helix 12
12
A
264 269Right-handed alpha
Helix 13
13
A
270 272Right-handed 310
Helix 14
14
A
293 297Right-handed 310
Helix 15
15
A
302 314Right-handed alpha
Helix 16
16
A
333 356Right-handed alpha
Helix 17
17
A
366 374Right-handed 310
Helix 18
18
A
412 415Right-handed 310
Helix 19
19
B
10 15Right-handed alpha
Helix 20
20
B
20 28Right-handed alpha
Helix 21
21
B
38 44Right-handed alpha
Helix 22
22
B
53 57Right-handed 310
Helix 23
23
B
63 74Right-handed alpha
Helix 24
24
B
100 104Right-handed 310
Helix 25
25
B
105 110Right-handed 310
Helix 26
26
B
112 124Right-handed alpha
Helix 27
27
B
145 162Right-handed alpha
Helix 28
28
B
187 199Right-handed alpha
Helix 29
29
B
232 236Right-handed 310
Helix 30
30
B
264 269Right-handed alpha
Helix 31
31
B
270 272Right-handed 310
Helix 32
32
B
293 300Right-handed 310
Helix 33
33
B
302 315Right-handed alpha
Helix 34
34
B
333 357Right-handed alpha
Helix 35
35
B
366 374Right-handed 310
Helix 36
36
B
412 415Right-handed 310
Back to top of page

There are 8 sheets in PDB entry 3MO4. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
203 206first strand
Strand 2
A
168 171parallel
Strand 3
A
127 132parallel
Strand 4
A
78 84parallel
Strand 5
A
31 35parallel
Strand 6
A
318 323parallel
Strand 7
A
280 285parallel
Strand 8
A
212 213parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
228 230first strand
Strand 2
A
275 277anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
360 363first strand
Strand 2
A
392 410anti-parallel
Strand 3
A
445 464anti-parallel
Strand 4
A
418 426anti-parallel
Strand 5
A
432 438anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
360 363first strand
Strand 2
A
392 410anti-parallel
Strand 3
A
470 476anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
203 206first strand
Strand 2
B
168 171parallel
Strand 3
B
127 132parallel
Strand 4
B
78 84parallel
Strand 5
B
31 35parallel
Strand 6
B
318 323parallel
Strand 7
B
280 285parallel
Strand 8
B
212 213parallel
Back to list of sheets
Back to top of page

There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
228 230first strand
Strand 2
B
275 277anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
360 363first strand
Strand 2
B
392 410anti-parallel
Strand 3
B
445 464anti-parallel
Strand 4
B
418 426anti-parallel
Strand 5
B
432 438anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
360 363first strand
Strand 2
B
392 410anti-parallel
Strand 3
B
470 476anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il