Analysis of interatomic Contacts of Structural Units in PDB entry:
3MOG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3MOG entry

There are 3 chains in PDB entry 3MOG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 4TYR 473
B
 ASN 4TYR 473
C
 LEU 3GLU 474
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 75 helices in PDB entry 3MOG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 27Right-handed alpha
Helix 2
2
A
37 54Right-handed alpha
Helix 3
3
A
62 72Right-handed alpha
Helix 4
4
A
78 85Right-handed 310
Helix 5
5
A
95 110Right-handed alpha
Helix 6
6
A
124 129Right-handed alpha
Helix 7
7
A
134 136Right-handed 310
Helix 8
8
A
162 176Right-handed alpha
Helix 9
9
A
190 195Right-handed alpha
Helix 10
10
A
195 208Right-handed alpha
Helix 11
11
A
212 223Right-handed alpha
Helix 12
12
A
229 238Right-handed alpha
Helix 13
13
A
238 253Right-handed alpha
Helix 14
14
A
256 260Right-handed 310
Helix 15
15
A
262 271Right-handed alpha
Helix 16
16
A
275 279Right-handed 310
Helix 17
17
A
299 303Right-handed 310
Helix 18
18
A
329 338Right-handed alpha
Helix 19
19
A
361 374Right-handed alpha
Helix 20
20
A
389 407Right-handed alpha
Helix 21
21
A
411 423Right-handed alpha
Helix 22
22
A
428 437Right-handed alpha
Helix 23
23
A
437 453Right-handed alpha
Helix 24
24
A
454 458Right-handed 310
Helix 25
25
A
460 471Right-handed alpha
Helix 26
26
B
14 26Right-handed alpha
Helix 27
27
B
37 53Right-handed alpha
Helix 28
28
B
62 71Right-handed alpha
Helix 29
29
B
79 85Right-handed 310
Helix 30
30
B
95 106Right-handed alpha
Helix 31
31
B
124 129Right-handed alpha
Helix 32
32
B
134 136Right-handed 310
Helix 33
33
B
162 175Right-handed alpha
Helix 34
34
B
190 195Right-handed alpha
Helix 35
35
B
195 208Right-handed alpha
Helix 36
36
B
212 223Right-handed alpha
Helix 37
37
B
229 238Right-handed alpha
Helix 38
38
B
238 253Right-handed alpha
Helix 39
39
B
256 260Right-handed 310
Helix 40
40
B
262 271Right-handed alpha
Helix 41
41
B
275 279Right-handed 310
Helix 42
42
B
299 303Right-handed 310
Helix 43
43
B
329 338Right-handed alpha
Helix 44
44
B
361 374Right-handed alpha
Helix 45
45
B
389 407Right-handed alpha
Helix 46
46
B
411 423Right-handed alpha
Helix 47
47
B
428 437Right-handed alpha
Helix 48
48
B
437 453Right-handed alpha
Helix 49
49
B
454 458Right-handed 310
Helix 50
50
B
460 471Right-handed alpha
Helix 51
51
C
14 27Right-handed alpha
Helix 52
52
C
37 58Right-handed alpha
Helix 53
53
C
62 72Right-handed alpha
Helix 54
54
C
78 85Right-handed 310
Helix 55
55
C
95 110Right-handed alpha
Helix 56
56
C
124 129Right-handed alpha
Helix 57
57
C
134 136Right-handed 310
Helix 58
58
C
162 176Right-handed alpha
Helix 59
59
C
190 195Right-handed alpha
Helix 60
60
C
195 208Right-handed alpha
Helix 61
61
C
212 223Right-handed alpha
Helix 62
62
C
229 238Right-handed alpha
Helix 63
63
C
238 253Right-handed alpha
Helix 64
64
C
256 260Right-handed 310
Helix 65
65
C
262 271Right-handed alpha
Helix 66
66
C
275 279Right-handed 310
Helix 67
67
C
299 303Right-handed 310
Helix 68
68
C
329 338Right-handed alpha
Helix 69
69
C
361 374Right-handed alpha
Helix 70
70
C
389 407Right-handed alpha
Helix 71
71
C
411 423Right-handed alpha
Helix 72
72
C
428 437Right-handed alpha
Helix 73
73
C
437 453Right-handed alpha
Helix 74
74
C
454 458Right-handed 310
Helix 75
75
C
460 474Right-handed alpha
Back to top of page

There are 6 sheets in PDB entry 3MOG. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
73 76first strand
Strand 2
A
31 34parallel
Strand 3
A
8 11parallel
Strand 4
A
87 90parallel
Strand 5
A
115 118parallel
Strand 6
A
138 143parallel
Strand 7
A
152 157anti-parallel
Strand 8
A
179 184parallel
Back to list of sheets
Back to top of page

There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
307 309first strand
Strand 2
A
314 317anti-parallel
Strand 3
A
320 324anti-parallel
Strand 4
A
341 345parallel
Strand 5
A
351 356anti-parallel
Strand 6
A
378 381parallel
Back to list of sheets
Back to top of page

There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
73 76first strand
Strand 2
B
31 34parallel
Strand 3
B
8 11parallel
Strand 4
B
87 90parallel
Strand 5
B
115 118parallel
Strand 6
B
138 143parallel
Strand 7
B
152 157anti-parallel
Strand 8
B
179 184parallel
Back to list of sheets
Back to top of page

There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
307 309first strand
Strand 2
B
314 317anti-parallel
Strand 3
B
320 324anti-parallel
Strand 4
B
341 345parallel
Strand 5
B
351 356anti-parallel
Strand 6
B
378 381parallel
Back to list of sheets
Back to top of page

There are 8 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
73 76first strand
Strand 2
C
31 34parallel
Strand 3
C
8 11parallel
Strand 4
C
87 90parallel
Strand 5
C
115 118parallel
Strand 6
C
138 143parallel
Strand 7
C
152 157anti-parallel
Strand 8
C
179 184parallel
Back to list of sheets
Back to top of page

There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
307 309first strand
Strand 2
C
314 317anti-parallel
Strand 3
C
320 324anti-parallel
Strand 4
C
341 345parallel
Strand 5
C
351 356anti-parallel
Strand 6
C
378 381parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il