Analysis of interatomic Contacts of Structural Units in PDB entry:
3MPS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3MPS entry

There are 8 chains in PDB entry 3MPS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 2GLU 171
B
 VAL 2GLU 171
D
 VAL 2GLU 171
F
 VAL 2GLU 171
G
 VAL 2GLU 171
H
 VAL 2GLU 171
I
 VAL 2GLU 171
K
 VAL 2GLU 171
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 55 helices in PDB entry 3MPS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
5 36Right-handed alpha
Helix 2
2
A
38 63Right-handed alpha
Helix 3
3
A
68 86Right-handed alpha
Helix 4
4
A
86 98Right-handed alpha
Helix 5
5
A
100 114Right-handed alpha
Helix 6
6
A
114 130Right-handed alpha
Helix 7
7
A
163 167Right-handed 310
Helix 8
8
B
5 36Right-handed alpha
Helix 9
9
B
38 63Right-handed alpha
Helix 10
10
B
68 86Right-handed alpha
Helix 11
11
B
86 99Right-handed alpha
Helix 12
12
B
100 114Right-handed alpha
Helix 13
13
B
114 130Right-handed alpha
Helix 14
14
B
163 167Right-handed 310
Helix 15
15
D
5 36Right-handed alpha
Helix 16
16
D
38 63Right-handed alpha
Helix 17
17
D
68 86Right-handed alpha
Helix 18
18
D
86 98Right-handed alpha
Helix 19
19
D
100 114Right-handed alpha
Helix 20
20
D
114 130Right-handed alpha
Helix 21
21
D
163 167Right-handed 310
Helix 22
22
F
5 36Right-handed alpha
Helix 23
23
F
38 63Right-handed alpha
Helix 24
24
F
68 86Right-handed alpha
Helix 25
25
F
86 98Right-handed alpha
Helix 26
26
F
100 114Right-handed alpha
Helix 27
27
F
114 131Right-handed alpha
Helix 28
28
F
163 167Right-handed 310
Helix 29
29
G
5 36Right-handed alpha
Helix 30
30
G
38 63Right-handed alpha
Helix 31
31
G
68 86Right-handed alpha
Helix 32
32
G
86 98Right-handed alpha
Helix 33
33
G
100 114Right-handed alpha
Helix 34
34
G
114 129Right-handed alpha
Helix 35
35
G
163 167Right-handed 310
Helix 36
36
H
5 36Right-handed alpha
Helix 37
37
H
38 63Right-handed alpha
Helix 38
38
H
68 86Right-handed alpha
Helix 39
39
H
86 98Right-handed alpha
Helix 40
40
H
100 114Right-handed alpha
Helix 41
41
H
115 129Right-handed alpha
Helix 42
42
H
163 167Right-handed 310
Helix 43
43
I
5 36Right-handed alpha
Helix 44
44
I
38 63Right-handed alpha
Helix 45
45
I
68 86Right-handed alpha
Helix 46
46
I
86 98Right-handed alpha
Helix 47
47
I
100 130Right-handed alpha
Helix 48
48
I
163 167Right-handed 310
Helix 49
49
K
5 36Right-handed alpha
Helix 50
50
K
38 63Right-handed alpha
Helix 51
51
K
68 86Right-handed alpha
Helix 52
52
K
86 98Right-handed alpha
Helix 53
53
K
100 114Right-handed alpha
Helix 54
54
K
114 129Right-handed alpha
Helix 55
55
K
163 167Right-handed 310
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There are 8 sheets in PDB entry 3MPS. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
148 150first strand
Strand 2
A
139 141anti-parallel
Strand 3
A
168 170anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
148 150first strand
Strand 2
B
139 141anti-parallel
Strand 3
B
168 170anti-parallel
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There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
148 150first strand
Strand 2
D
139 141anti-parallel
Strand 3
D
168 170anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
148 150first strand
Strand 2
F
139 141anti-parallel
Strand 3
F
168 170anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
148 150first strand
Strand 2
G
139 141anti-parallel
Strand 3
G
168 170anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
148 150first strand
Strand 2
H
139 141anti-parallel
Strand 3
H
168 170anti-parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
148 150first strand
Strand 2
I
139 141anti-parallel
Strand 3
I
168 170anti-parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
K
148 150first strand
Strand 2
K
139 141anti-parallel
Strand 3
K
168 170anti-parallel
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