Analysis of interatomic Contacts of Structural Units in PDB entry:
3MSQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3MSQ entry

There are 4 chains in PDB entry 3MSQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 6SER 221
B
 THR 6SER 221
C
 THR 6SER 221
D
 THR 6SER 221
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 48 helices in PDB entry 3MSQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
9 23Right-handed alpha
Helix 2
2
A
30 42Right-handed alpha
Helix 3
3
A
45 56Right-handed alpha
Helix 4
4
A
58 68Right-handed alpha
Helix 5
5
A
75 81Right-handed alpha
Helix 6
6
A
86 98Right-handed alpha
Helix 7
7
A
112 133Right-handed alpha
Helix 8
8
A
137 152Right-handed alpha
Helix 9
9
A
154 172Right-handed alpha
Helix 10
10
A
175 192Right-handed alpha
Helix 11
11
A
201 205Right-handed 310
Helix 12
12
A
209 218Right-handed alpha
Helix 13
13
B
9 24Right-handed alpha
Helix 14
14
B
30 42Right-handed alpha
Helix 15
15
B
45 56Right-handed alpha
Helix 16
16
B
58 68Right-handed alpha
Helix 17
17
B
75 81Right-handed alpha
Helix 18
18
B
86 98Right-handed alpha
Helix 19
19
B
112 133Right-handed alpha
Helix 20
20
B
137 152Right-handed alpha
Helix 21
21
B
154 172Right-handed alpha
Helix 22
22
B
175 192Right-handed alpha
Helix 23
23
B
201 205Right-handed 310
Helix 24
24
B
209 218Right-handed alpha
Helix 25
25
C
9 24Right-handed alpha
Helix 26
26
C
30 42Right-handed alpha
Helix 27
27
C
45 56Right-handed alpha
Helix 28
28
C
58 68Right-handed alpha
Helix 29
29
C
75 81Right-handed alpha
Helix 30
30
C
86 98Right-handed alpha
Helix 31
31
C
112 133Right-handed alpha
Helix 32
32
C
137 152Right-handed alpha
Helix 33
33
C
154 172Right-handed alpha
Helix 34
34
C
175 192Right-handed alpha
Helix 35
35
C
201 205Right-handed 310
Helix 36
36
C
209 218Right-handed alpha
Helix 37
37
D
9 24Right-handed alpha
Helix 38
38
D
30 42Right-handed alpha
Helix 39
39
D
45 56Right-handed alpha
Helix 40
40
D
58 68Right-handed alpha
Helix 41
41
D
75 81Right-handed alpha
Helix 42
42
D
86 98Right-handed alpha
Helix 43
43
D
112 133Right-handed alpha
Helix 44
44
D
137 152Right-handed alpha
Helix 45
45
D
154 172Right-handed alpha
Helix 46
46
D
175 192Right-handed alpha
Helix 47
47
D
201 205Right-handed 310
Helix 48
48
D
209 218Right-handed alpha
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There are no sheets in PDB entry 3MSQ
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il