Analysis of interatomic Contacts of Structural Units in PDB entry:
3MST


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3MST entry

There is 1 chain in PDB entry 3MST (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS -7GLY 225
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 3MST. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
-7 -3Right-handed 310
Helix 2
2
A
9 11Right-handed 310
Helix 3
3
A
12 18Right-handed alpha
Helix 4
4
A
19 22Right-handed 310
Helix 5
5
A
44 49Right-handed 310
Helix 6
6
A
80 94Right-handed alpha
Helix 7
7
A
101 111Right-handed alpha
Helix 8
8
A
127 134Right-handed alpha
Helix 9
9
A
149 166Right-handed alpha
Helix 10
10
A
166 179Right-handed alpha
Helix 11
11
A
182 190Right-handed alpha
Helix 12
12
A
191 193Right-handed 310
Helix 13
13
A
200 212Right-handed alpha
Helix 14
14
A
213 214Right-handed 310
Helix 15
15
A
215 221Right-handed 310
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There are 2 sheets in PDB entry 3MST. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 28first strand
Strand 2
A
3 5parallel
Strand 3
A
38 42parallel
Strand 4
A
141 145anti-parallel
Strand 5
A
52 58anti-parallel
Strand 6
A
196 198anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
96 99first strand
Strand 2
A
72 75parallel
Strand 3
A
114 118parallel
Strand 4
A
62 66anti-parallel
Strand 5
A
125 126anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il