Analysis of interatomic Contacts of Structural Units in PDB entry:
3MSY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3MSY entry

There are 6 chains in PDB entry 3MSY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 28ASP 381
B
 ILE 28ASP 381
C
 ILE 28VAL 385
D
 ILE 28ASP 381
E
 ILE 28ASP 381
F
 ILE 28ASP 381
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 95 helices in PDB entry 3MSY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
73 84Right-handed alpha
Helix 2
2
A
85 89Right-handed 310
Helix 3
3
A
96 105Right-handed alpha
Helix 4
4
A
106 109Right-handed 310
Helix 5
5
A
115 137Right-handed alpha
Helix 6
6
A
140 145Right-handed alpha
Helix 7
7
A
167 178Right-handed alpha
Helix 8
8
A
191 207Right-handed alpha
Helix 9
9
A
221 232Right-handed alpha
Helix 10
10
A
245 247Right-handed 310
Helix 11
11
A
248 260Right-handed alpha
Helix 12
12
A
272 283Right-handed alpha
Helix 13
13
A
297 310Right-handed alpha
Helix 14
14
A
320 331Right-handed alpha
Helix 15
15
A
345 352Right-handed alpha
Helix 16
16
A
376 381Right-handed alpha
Helix 17
17
B
73 84Right-handed alpha
Helix 18
18
B
85 89Right-handed 310
Helix 19
19
B
96 105Right-handed alpha
Helix 20
20
B
106 109Right-handed 310
Helix 21
21
B
114 137Right-handed alpha
Helix 22
22
B
140 145Right-handed alpha
Helix 23
23
B
167 178Right-handed alpha
Helix 24
24
B
191 207Right-handed alpha
Helix 25
25
B
221 232Right-handed alpha
Helix 26
26
B
233 235Right-handed 310
Helix 27
27
B
248 260Right-handed alpha
Helix 28
28
B
272 283Right-handed alpha
Helix 29
29
B
291 295Right-handed 310
Helix 30
30
B
297 311Right-handed alpha
Helix 31
31
B
320 331Right-handed alpha
Helix 32
32
B
345 351Right-handed alpha
Helix 33
33
C
73 85Right-handed alpha
Helix 34
34
C
86 89Right-handed 310
Helix 35
35
C
96 105Right-handed alpha
Helix 36
36
C
106 109Right-handed 310
Helix 37
37
C
114 137Right-handed alpha
Helix 38
38
C
140 145Right-handed alpha
Helix 39
39
C
167 178Right-handed alpha
Helix 40
40
C
191 207Right-handed alpha
Helix 41
41
C
221 232Right-handed alpha
Helix 42
42
C
248 260Right-handed alpha
Helix 43
43
C
272 283Right-handed alpha
Helix 44
44
C
291 295Right-handed 310
Helix 45
45
C
297 311Right-handed alpha
Helix 46
46
C
320 331Right-handed alpha
Helix 47
47
C
345 352Right-handed alpha
Helix 48
48
C
376 384Right-handed alpha
Helix 49
49
D
73 85Right-handed alpha
Helix 50
50
D
86 89Right-handed 310
Helix 51
51
D
96 105Right-handed alpha
Helix 52
52
D
106 110Right-handed 310
Helix 53
53
D
115 138Right-handed alpha
Helix 54
54
D
140 145Right-handed alpha
Helix 55
55
D
167 178Right-handed alpha
Helix 56
56
D
191 207Right-handed alpha
Helix 57
57
D
221 232Right-handed alpha
Helix 58
58
D
248 260Right-handed alpha
Helix 59
59
D
272 282Right-handed alpha
Helix 60
60
D
291 295Right-handed 310
Helix 61
61
D
297 310Right-handed alpha
Helix 62
62
D
320 331Right-handed alpha
Helix 63
63
D
345 352Right-handed alpha
Helix 64
64
D
376 381Right-handed alpha
Helix 65
65
E
73 84Right-handed alpha
Helix 66
66
E
85 90Right-handed alpha
Helix 67
67
E
96 105Right-handed alpha
Helix 68
68
E
106 109Right-handed 310
Helix 69
69
E
114 137Right-handed alpha
Helix 70
70
E
140 145Right-handed alpha
Helix 71
71
E
167 177Right-handed alpha
Helix 72
72
E
191 207Right-handed alpha
Helix 73
73
E
221 232Right-handed alpha
Helix 74
74
E
248 260Right-handed alpha
Helix 75
75
E
272 283Right-handed alpha
Helix 76
76
E
291 295Right-handed 310
Helix 77
77
E
297 312Right-handed alpha
Helix 78
78
E
320 331Right-handed alpha
Helix 79
79
E
346 352Right-handed alpha
Helix 80
80
E
376 381Right-handed alpha
Helix 81
81
F
73 84Right-handed alpha
Helix 82
82
F
85 89Right-handed 310
Helix 83
83
F
96 105Right-handed alpha
Helix 84
84
F
106 109Right-handed 310
Helix 85
85
F
114 137Right-handed alpha
Helix 86
86
F
140 145Right-handed alpha
Helix 87
87
F
167 178Right-handed alpha
Helix 88
88
F
191 207Right-handed alpha
Helix 89
89
F
221 232Right-handed alpha
Helix 90
90
F
248 260Right-handed alpha
Helix 91
91
F
272 283Right-handed alpha
Helix 92
92
F
297 311Right-handed alpha
Helix 93
93
F
320 330Right-handed alpha
Helix 94
94
F
345 351Right-handed alpha
Helix 95
95
F
376 381Right-handed alpha
Back to top of page

There are 18 sheets in PDB entry 3MSY. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 40first strand
Strand 2
A
48 57anti-parallel
Strand 3
A
62 67anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
314 315first strand
Strand 2
A
287 288parallel
Strand 3
A
264 266parallel
Strand 4
A
240 241parallel
Strand 5
A
211 215parallel
Strand 6
A
182 186parallel
Strand 7
A
151 158parallel
Strand 8
A
337 340parallel
Back to list of sheets
Back to top of page

There are 9 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
314 315first strand
Strand 2
A
287 288parallel
Strand 3
A
264 266parallel
Strand 4
A
240 241parallel
Strand 5
A
211 215parallel
Strand 6
A
182 186parallel
Strand 7
A
151 158parallel
Strand 8
A
362 364anti-parallel
Strand 9
A
358 359anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
30 40first strand
Strand 2
B
48 57anti-parallel
Strand 3
B
62 67anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
314 315first strand
Strand 2
B
287 288parallel
Strand 3
B
264 266parallel
Strand 4
B
240 241parallel
Strand 5
B
211 215parallel
Strand 6
B
182 186parallel
Strand 7
B
151 158parallel
Strand 8
B
337 339parallel
Back to list of sheets
Back to top of page

There are 8 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
314 315first strand
Strand 2
B
287 288parallel
Strand 3
B
264 266parallel
Strand 4
B
240 241parallel
Strand 5
B
211 215parallel
Strand 6
B
182 186parallel
Strand 7
B
151 158parallel
Strand 8
B
362 364anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
30 40first strand
Strand 2
C
48 57anti-parallel
Strand 3
C
62 67anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
314 315first strand
Strand 2
C
287 288parallel
Strand 3
C
264 266parallel
Strand 4
C
237 241parallel
Strand 5
C
211 215parallel
Strand 6
C
182 186parallel
Strand 7
C
151 158parallel
Strand 8
C
337 339parallel
Back to list of sheets
Back to top of page

There are 8 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
314 315first strand
Strand 2
C
287 288parallel
Strand 3
C
264 266parallel
Strand 4
C
237 241parallel
Strand 5
C
211 215parallel
Strand 6
C
182 186parallel
Strand 7
C
151 158parallel
Strand 8
C
362 364anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
30 40first strand
Strand 2
D
48 57anti-parallel
Strand 3
D
62 67anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
314 315first strand
Strand 2
D
287 288parallel
Strand 3
D
264 266parallel
Strand 4
D
240 241parallel
Strand 5
D
211 215parallel
Strand 6
D
182 186parallel
Strand 7
D
151 158parallel
Strand 8
D
337 340parallel
Back to list of sheets
Back to top of page

There are 8 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
314 315first strand
Strand 2
D
287 288parallel
Strand 3
D
264 266parallel
Strand 4
D
240 241parallel
Strand 5
D
211 215parallel
Strand 6
D
182 186parallel
Strand 7
D
151 158parallel
Strand 8
D
362 364anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
30 40first strand
Strand 2
E
48 57anti-parallel
Strand 3
E
62 67anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
314 315first strand
Strand 2
E
287 288parallel
Strand 3
E
264 266parallel
Strand 4
E
240 241parallel
Strand 5
E
211 215parallel
Strand 6
E
182 186parallel
Strand 7
E
151 158parallel
Strand 8
E
337 339parallel
Back to list of sheets
Back to top of page

There are 8 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
314 315first strand
Strand 2
E
287 288parallel
Strand 3
E
264 266parallel
Strand 4
E
240 241parallel
Strand 5
E
211 215parallel
Strand 6
E
182 186parallel
Strand 7
E
151 158parallel
Strand 8
E
362 364anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
30 37first strand
Strand 2
F
51 57anti-parallel
Strand 3
F
62 67anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
314 315first strand
Strand 2
F
287 288parallel
Strand 3
F
264 266parallel
Strand 4
F
240 241parallel
Strand 5
F
211 215parallel
Strand 6
F
182 186parallel
Strand 7
F
151 158parallel
Strand 8
F
337 340parallel
Back to list of sheets
Back to top of page

There are 8 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
314 315first strand
Strand 2
F
287 288parallel
Strand 3
F
264 266parallel
Strand 4
F
240 241parallel
Strand 5
F
211 215parallel
Strand 6
F
182 186parallel
Strand 7
F
151 158parallel
Strand 8
F
362 364anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il