Analysis of interatomic Contacts of Structural Units in PDB entry:
3MT1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3MT1 entry

There are 2 chains in PDB entry 3MT1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 2SER 365
B
 MSE 1SER 365
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 3MT1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 29Right-handed alpha
Helix 2
2
A
41 43Right-handed 310
Helix 3
3
A
44 49Right-handed alpha
Helix 4
4
A
59 70Right-handed alpha
Helix 5
5
A
85 93Right-handed alpha
Helix 6
6
A
100 108Right-handed alpha
Helix 7
7
A
109 112Right-handed 310
Helix 8
8
A
145 151Right-handed alpha
Helix 9
9
A
152 156Right-handed 310
Helix 10
10
A
169 189Right-handed alpha
Helix 11
11
A
208 224Right-handed alpha
Helix 12
12
A
232 237Right-handed alpha
Helix 13
13
A
262 267Right-handed alpha
Helix 14
14
A
267 273Right-handed alpha
Helix 15
15
A
331 335Right-handed 310
Helix 16
16
A
356 365Right-handed alpha
Helix 17
17
B
11 29Right-handed alpha
Helix 18
18
B
41 43Right-handed 310
Helix 19
19
B
44 50Right-handed alpha
Helix 20
20
B
59 70Right-handed alpha
Helix 21
21
B
82 93Right-handed alpha
Helix 22
22
B
100 108Right-handed alpha
Helix 23
23
B
145 151Right-handed alpha
Helix 24
24
B
169 191Right-handed alpha
Helix 25
25
B
208 224Right-handed alpha
Helix 26
26
B
232 237Right-handed alpha
Helix 27
27
B
262 267Right-handed alpha
Helix 28
28
B
267 274Right-handed alpha
Helix 29
29
B
325 329Right-handed 310
Helix 30
30
B
331 335Right-handed 310
Helix 31
31
B
356 363Right-handed alpha
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There are 6 sheets in PDB entry 3MT1. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
300 306first strand
Strand 2
A
286 291anti-parallel
Strand 3
A
255 259parallel
Strand 4
A
240 251anti-parallel
Strand 5
A
315 318anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
300 306first strand
Strand 2
A
286 291anti-parallel
Strand 3
A
255 259parallel
Strand 4
A
240 251anti-parallel
Strand 5
A
6 10anti-parallel
Strand 6
A
339 343parallel
Strand 7
A
349 353anti-parallel
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There are 9 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
31 35first strand
Strand 2
A
54 57parallel
Strand 3
A
73 78parallel
Strand 4
A
95 98parallel
Strand 5
A
115 120parallel
Strand 6
A
158 161parallel
Strand 7
A
193 195parallel
Strand 8
A
226 229parallel
Strand 9
A
31 35parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
300 306first strand
Strand 2
B
286 291anti-parallel
Strand 3
B
255 259parallel
Strand 4
B
240 250anti-parallel
Strand 5
B
315 318anti-parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
300 306first strand
Strand 2
B
286 291anti-parallel
Strand 3
B
255 259parallel
Strand 4
B
240 250anti-parallel
Strand 5
B
6 10anti-parallel
Strand 6
B
339 343parallel
Strand 7
B
349 353anti-parallel
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There are 9 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
31 32first strand
Strand 2
B
226 229parallel
Strand 3
B
193 195parallel
Strand 4
B
158 160parallel
Strand 5
B
115 119parallel
Strand 6
B
95 98parallel
Strand 7
B
73 77parallel
Strand 8
B
54 57parallel
Strand 9
B
34 35parallel
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