Analysis of interatomic Contacts of Structural Units in PDB entry:
3MTE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3MTE entry

There are 2 chains in PDB entry 3MTE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1HIS 219
B
 MET 1HIS 219
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 3MTE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
13 22Right-handed alpha
Helix 2
2
A
36 46Right-handed alpha
Helix 3
3
A
57 60Right-handed 310
Helix 4
4
A
61 69Right-handed alpha
Helix 5
5
A
71 75Right-handed 310
Helix 6
6
A
86 90Right-handed 310
Helix 7
7
A
91 95Right-handed 310
Helix 8
8
A
107 116Right-handed alpha
Helix 9
9
A
118 127Right-handed alpha
Helix 10
10
A
143 153Right-handed alpha
Helix 11
11
A
159 165Right-handed alpha
Helix 12
12
A
165 175Right-handed alpha
Helix 13
13
A
186 191Right-handed alpha
Helix 14
14
A
195 204Right-handed alpha
Helix 15
15
B
13 22Right-handed alpha
Helix 16
16
B
36 45Right-handed alpha
Helix 17
17
B
57 60Right-handed 310
Helix 18
18
B
61 69Right-handed alpha
Helix 19
19
B
71 75Right-handed 310
Helix 20
20
B
86 90Right-handed 310
Helix 21
21
B
91 95Right-handed 310
Helix 22
22
B
107 116Right-handed alpha
Helix 23
23
B
118 127Right-handed alpha
Helix 24
24
B
146 153Right-handed alpha
Helix 25
25
B
159 165Right-handed alpha
Helix 26
26
B
165 176Right-handed alpha
Helix 27
27
B
186 191Right-handed alpha
Helix 28
28
B
195 203Right-handed alpha
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There are 4 sheets in PDB entry 3MTE. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 5first strand
Strand 2
A
8 11anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
80 84first strand
Strand 2
A
49 55parallel
Strand 3
A
26 31parallel
Strand 4
A
98 104parallel
Strand 5
A
129 139parallel
Strand 6
A
209 216anti-parallel
Strand 7
A
177 185anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2 5first strand
Strand 2
B
8 11anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
80 83first strand
Strand 2
B
49 54parallel
Strand 3
B
26 31parallel
Strand 4
B
98 104parallel
Strand 5
B
129 139parallel
Strand 6
B
209 216anti-parallel
Strand 7
B
177 185anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il