Analysis of interatomic Contacts of Structural Units in PDB entry:
3MTI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3MTI entry

There are 2 chains in PDB entry 3MTI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 0GLN 182
B
 ALA 0GLN 182
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 3MTI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
4 15Right-handed alpha
Helix 2
2
A
31 39Right-handed alpha
Helix 3
3
A
50 65Right-handed alpha
Helix 4
4
A
75 82Right-handed 310
Helix 5
5
A
107 121Right-handed alpha
Helix 6
6
A
140 153Right-handed alpha
Helix 7
7
B
4 15Right-handed alpha
Helix 8
8
B
31 39Right-handed alpha
Helix 9
9
B
50 65Right-handed alpha
Helix 10
10
B
75 77Right-handed 310
Helix 11
11
B
78 83Right-handed alpha
Helix 12
12
B
109 121Right-handed alpha
Helix 13
13
B
140 143Right-handed 310
Helix 14
14
B
144 152Right-handed alpha
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There is 1 sheet ( A) in PDB entry 3MTI.

There are 14 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
69 73first strand
Strand 2
A
43 48parallel
Strand 3
A
22 25parallel
Strand 4
A
87 94parallel
Strand 5
A
122 132parallel
Strand 6
A
174 180anti-parallel
Strand 7
A
158 165anti-parallel
Strand 8
B
158 165anti-parallel
Strand 9
B
174 180anti-parallel
Strand 10
B
122 132anti-parallel
Strand 11
B
87 94parallel
Strand 12
B
22 25parallel
Strand 13
B
43 48parallel
Strand 14
B
69 73parallel
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