Analysis of interatomic Contacts of Structural Units in PDB entry:
3MTJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3MTJ entry

There is 1 chain in PDB entry 3MTJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE -2GLY 435
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 3MTJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 25Right-handed alpha
Helix 2
2
A
25 34Right-handed alpha
Helix 3
3
A
46 55Right-handed alpha
Helix 4
4
A
63 68Right-handed alpha
Helix 5
5
A
84 95Right-handed alpha
Helix 6
6
A
103 122Right-handed alpha
Helix 7
7
A
127 131Right-handed 310
Helix 8
8
A
136 143Right-handed alpha
Helix 9
9
A
158 172Right-handed alpha
Helix 10
10
A
174 185Right-handed alpha
Helix 11
11
A
192 197Right-handed alpha
Helix 12
12
A
198 214Right-handed alpha
Helix 13
13
A
218 222Right-handed 310
Helix 14
14
A
231 242Right-handed alpha
Helix 15
15
A
272 276Right-handed 310
Helix 16
16
A
301 323Right-handed alpha
Helix 17
17
A
334 338Right-handed 310
Helix 18
18
A
345 348Right-handed 310
Helix 19
19
A
363 376Right-handed alpha
Helix 20
20
A
406 417Right-handed alpha
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There are 3 sheets in PDB entry 3MTJ. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
59 60first strand
Strand 2
A
37 43parallel
Strand 3
A
4 9parallel
Strand 4
A
74 77parallel
Strand 5
A
98 101parallel
Strand 6
A
125 126parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
223 224first strand
Strand 2
A
258 268parallel
Strand 3
A
427 431parallel
Strand 4
A
350 359anti-parallel
Strand 5
A
395 401anti-parallel
Strand 6
A
380 385anti-parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
291 298first strand
Strand 2
A
280 287anti-parallel
Strand 3
A
150 156anti-parallel
Strand 4
A
243 253anti-parallel
Strand 5
A
258 268anti-parallel
Strand 6
A
427 431parallel
Strand 7
A
350 359anti-parallel
Strand 8
A
404 405anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il