Analysis of interatomic Contacts of Structural Units in PDB entry:
3MUQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3MUQ entry

There are 2 chains in PDB entry 3MUQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 27LEU 259
B
 GLU 27LEU 259
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 3MUQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
35 41Right-handed alpha
Helix 2
2
A
41 55Right-handed alpha
Helix 3
3
A
64 74Right-handed alpha
Helix 4
4
A
84 94Right-handed alpha
Helix 5
5
A
125 136Right-handed alpha
Helix 6
6
A
147 161Right-handed alpha
Helix 7
7
A
175 186Right-handed alpha
Helix 8
8
A
194 201Right-handed alpha
Helix 9
9
A
202 204Right-handed 310
Helix 10
10
A
213 215Right-handed 310
Helix 11
11
A
234 247Right-handed alpha
Helix 12
12
A
247 259Right-handed alpha
Helix 13
13
B
35 41Right-handed alpha
Helix 14
14
B
42 45Right-handed 310
Helix 15
15
B
46 55Right-handed alpha
Helix 16
16
B
64 74Right-handed alpha
Helix 17
17
B
84 94Right-handed alpha
Helix 18
18
B
125 136Right-handed alpha
Helix 19
19
B
147 161Right-handed alpha
Helix 20
20
B
175 187Right-handed alpha
Helix 21
21
B
194 201Right-handed alpha
Helix 22
22
B
202 204Right-handed 310
Helix 23
23
B
213 215Right-handed 310
Helix 24
24
B
234 247Right-handed alpha
Helix 25
25
B
247 259Right-handed alpha
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There are 5 sheets in PDB entry 3MUQ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 63first strand
Strand 2
A
28 34parallel
Strand 3
A
79 82parallel
Strand 4
A
217 225anti-parallel
Strand 5
A
97 112anti-parallel
Strand 6
A
190 193anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 63first strand
Strand 2
A
28 34parallel
Strand 3
A
79 82parallel
Strand 4
A
217 225anti-parallel
Strand 5
A
97 112anti-parallel
Strand 6
A
207 210anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
140 142first strand
Strand 2
A
169 171parallel
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There are 8 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
57 63first strand
Strand 2
B
28 34parallel
Strand 3
B
79 82parallel
Strand 4
B
217 225anti-parallel
Strand 5
B
97 112anti-parallel
Strand 6
B
189 193anti-parallel
Strand 7
B
140 142parallel
Strand 8
B
169 171parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
57 63first strand
Strand 2
B
28 34parallel
Strand 3
B
79 82parallel
Strand 4
B
217 225anti-parallel
Strand 5
B
97 112anti-parallel
Strand 6
B
207 210anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il