Analysis of interatomic Contacts of Structural Units in PDB entry:
3MV3

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 3MV3 entry

There are 6 chains in PDB entry 3MV3 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	MSE 0	VAL 1201
B	MSE 1	ASP 293
C	MSE 0	VAL 1201
D	MSE 1	ASP 293
E	MSE 0	VAL 1201
F	MSE 1	ASP 293

There are 95 helices in PDB entry 3MV3. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	0	908	Right-handed alpha
Helix 2	2	A	910	918	Right-handed alpha
Helix 3	3	A	919	932	Right-handed alpha
Helix 4	4	A	936	938	Right-handed 310
Helix 5	5	A	939	949	Right-handed alpha
Helix 6	6	A	986	1003	Right-handed alpha
Helix 7	7	A	1005	1022	Right-handed alpha
Helix 8	8	A	1027	1056	Right-handed alpha
Helix 9	9	A	1061	1073	Right-handed alpha
Helix 10	10	A	1078	1093	Right-handed alpha
Helix 11	11	A	1098	1111	Right-handed alpha
Helix 12	12	A	1116	1130	Right-handed alpha
Helix 13	13	A	1176	1178	Right-handed 310
Helix 14	14	B	3	11	Right-handed alpha
Helix 15	15	B	14	24	Right-handed alpha
Helix 16	16	B	30	44	Right-handed alpha
Helix 17	17	B	56	68	Right-handed alpha
Helix 18	18	B	72	78	Right-handed alpha
Helix 19	19	B	85	99	Right-handed alpha
Helix 20	20	B	101	114	Right-handed alpha
Helix 21	21	B	120	135	Right-handed alpha
Helix 22	22	B	137	150	Right-handed alpha
Helix 23	23	B	160	176	Right-handed alpha
Helix 24	24	B	181	194	Right-handed alpha
Helix 25	25	B	196	210	Right-handed alpha
Helix 26	26	B	212	225	Right-handed alpha
Helix 27	27	B	225	230	Right-handed alpha
Helix 28	28	B	233	237	Right-handed 310
Helix 29	29	B	239	254	Right-handed alpha
Helix 30	30	B	258	268	Right-handed alpha
Helix 31	31	B	272	291	Right-handed alpha
Helix 32	32	C	0	908	Right-handed alpha
Helix 33	33	C	910	918	Right-handed alpha
Helix 34	34	C	919	932	Right-handed alpha
Helix 35	35	C	936	938	Right-handed 310
Helix 36	36	C	939	949	Right-handed alpha
Helix 37	37	C	986	1003	Right-handed alpha
Helix 38	38	C	1005	1022	Right-handed alpha
Helix 39	39	C	1027	1056	Right-handed alpha
Helix 40	40	C	1061	1072	Right-handed alpha
Helix 41	41	C	1073	1075	Right-handed 310
Helix 42	42	C	1078	1093	Right-handed alpha
Helix 43	43	C	1098	1111	Right-handed alpha
Helix 44	44	C	1116	1128	Right-handed alpha
Helix 45	45	C	1176	1178	Right-handed 310
Helix 46	46	D	3	11	Right-handed alpha
Helix 47	47	D	14	24	Right-handed alpha
Helix 48	48	D	30	44	Right-handed alpha
Helix 49	49	D	56	68	Right-handed alpha
Helix 50	50	D	72	78	Right-handed alpha
Helix 51	51	D	85	99	Right-handed alpha
Helix 52	52	D	101	114	Right-handed alpha
Helix 53	53	D	120	135	Right-handed alpha
Helix 54	54	D	137	150	Right-handed alpha
Helix 55	55	D	160	176	Right-handed alpha
Helix 56	56	D	181	194	Right-handed alpha
Helix 57	57	D	196	210	Right-handed alpha
Helix 58	58	D	212	225	Right-handed alpha
Helix 59	59	D	225	230	Right-handed alpha
Helix 60	60	D	233	237	Right-handed 310
Helix 61	61	D	239	254	Right-handed alpha
Helix 62	62	D	258	268	Right-handed alpha
Helix 63	63	D	272	291	Right-handed alpha
Helix 64	64	E	0	908	Right-handed alpha
Helix 65	65	E	910	918	Right-handed alpha
Helix 66	66	E	919	932	Right-handed alpha
Helix 67	67	E	936	938	Right-handed 310
Helix 68	68	E	939	949	Right-handed alpha
Helix 69	69	E	986	1003	Right-handed alpha
Helix 70	70	E	1005	1022	Right-handed alpha
Helix 71	71	E	1027	1056	Right-handed alpha
Helix 72	72	E	1061	1072	Right-handed alpha
Helix 73	73	E	1073	1075	Right-handed 310
Helix 74	74	E	1078	1093	Right-handed alpha
Helix 75	75	E	1098	1111	Right-handed alpha
Helix 76	76	E	1116	1130	Right-handed alpha
Helix 77	77	E	1176	1178	Right-handed 310
Helix 78	78	F	3	11	Right-handed alpha
Helix 79	79	F	14	24	Right-handed alpha
Helix 80	80	F	30	44	Right-handed alpha
Helix 81	81	F	56	68	Right-handed alpha
Helix 82	82	F	72	78	Right-handed alpha
Helix 83	83	F	85	99	Right-handed alpha
Helix 84	84	F	101	115	Right-handed alpha
Helix 85	85	F	120	135	Right-handed alpha
Helix 86	86	F	137	150	Right-handed alpha
Helix 87	87	F	160	176	Right-handed alpha
Helix 88	88	F	181	194	Right-handed alpha
Helix 89	89	F	196	210	Right-handed alpha
Helix 90	90	F	212	225	Right-handed alpha
Helix 91	91	F	225	230	Right-handed alpha
Helix 92	92	F	233	237	Right-handed 310
Helix 93	93	F	239	254	Right-handed alpha
Helix 94	94	F	258	268	Right-handed alpha
Helix 95	95	F	272	291	Right-handed alpha

There are 9 sheets in PDB entry 3MV3. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	951	954	first strand
Strand 2	A	964	967	anti-parallel

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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1147	1149	first strand
Strand 2	A	1156	1158	anti-parallel

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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1163	1165	first strand
Strand 2	A	1172	1174	anti-parallel

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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	951	954	first strand
Strand 2	C	964	967	anti-parallel

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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1147	1149	first strand
Strand 2	C	1156	1158	anti-parallel

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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1163	1165	first strand
Strand 2	C	1172	1174	anti-parallel

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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	951	954	first strand
Strand 2	E	964	967	anti-parallel

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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	1147	1149	first strand
Strand 2	E	1156	1158	anti-parallel

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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	1163	1165	first strand
Strand 2	E	1172	1174	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 3MV3

Analysis of interatomic Contacts of Structural Units in PDB entry:
3MV3