Analysis of interatomic Contacts of Structural Units in PDB entry:
3MV6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3MV6 entry

There are 6 chains in PDB entry 3MV6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 1PHE 200
B
 PRO 1PHE 200
C
 PRO 1PHE 200
M
 PRO 301CYS 538
N
 PRO 301CYS 538
O
 PRO 301CYS 538
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 3MV6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
16 22Right-handed alpha
Helix 2
2
A
22 27Right-handed alpha
Helix 3
3
A
148 154Right-handed alpha
Helix 4
4
A
157 161Right-handed 310
Helix 5
5
A
163 168Right-handed alpha
Helix 6
6
B
16 22Right-handed alpha
Helix 7
7
B
22 27Right-handed alpha
Helix 8
8
B
148 155Right-handed alpha
Helix 9
9
B
157 161Right-handed 310
Helix 10
10
B
163 168Right-handed alpha
Helix 11
11
C
16 22Right-handed alpha
Helix 12
12
C
148 154Right-handed alpha
Helix 13
13
C
157 161Right-handed 310
Helix 14
14
C
163 168Right-handed alpha
Helix 15
15
M
324 328Right-handed 310
Helix 16
16
M
342 347Right-handed alpha
Helix 17
17
M
485 489Right-handed 310
Helix 18
18
M
491 495Right-handed 310
Helix 19
19
M
497 503Right-handed alpha
Helix 20
20
M
510 513Right-handed 310
Helix 21
21
N
324 328Right-handed 310
Helix 22
22
N
342 347Right-handed alpha
Helix 23
23
N
485 489Right-handed 310
Helix 24
24
N
491 495Right-handed 310
Helix 25
25
N
497 503Right-handed alpha
Helix 26
26
N
510 513Right-handed 310
Helix 27
27
O
324 328Right-handed 310
Helix 28
28
O
342 347Right-handed alpha
Helix 29
29
O
485 489Right-handed 310
Helix 30
30
O
491 495Right-handed 310
Helix 31
31
O
497 503Right-handed alpha
Helix 32
32
O
510 513Right-handed 310
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There are 22 sheets in PDB entry 3MV6. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
92 96first strand
Strand 2
A
67 71anti-parallel
Strand 3
A
126 131anti-parallel
Strand 4
A
139 145anti-parallel
Strand 5
A
171 177parallel
Strand 6
A
180 184anti-parallel
Strand 7
A
48 56parallel
Strand 8
A
103 109anti-parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
92 96first strand
Strand 2
A
67 71anti-parallel
Strand 3
A
126 131anti-parallel
Strand 4
A
139 145anti-parallel
Strand 5
A
171 177parallel
Strand 6
A
180 184anti-parallel
Strand 7
A
48 56parallel
Strand 8
A
187 188parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
198 199first strand
Strand 2
M
337 338parallel
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There are 8 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
92 96first strand
Strand 2
B
67 71anti-parallel
Strand 3
B
126 131anti-parallel
Strand 4
B
139 145anti-parallel
Strand 5
B
171 177parallel
Strand 6
B
180 184anti-parallel
Strand 7
B
48 56parallel
Strand 8
B
103 109anti-parallel
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There are 8 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
92 96first strand
Strand 2
B
67 71anti-parallel
Strand 3
B
126 131anti-parallel
Strand 4
B
139 145anti-parallel
Strand 5
B
171 177parallel
Strand 6
B
180 184anti-parallel
Strand 7
B
48 56parallel
Strand 8
B
187 188parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
198 199first strand
Strand 2
N
337 338parallel
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There are 8 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
92 96first strand
Strand 2
C
67 71anti-parallel
Strand 3
C
126 131anti-parallel
Strand 4
C
139 145anti-parallel
Strand 5
C
171 177parallel
Strand 6
C
180 184anti-parallel
Strand 7
C
48 56parallel
Strand 8
C
103 109anti-parallel
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There are 8 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
92 96first strand
Strand 2
C
67 71anti-parallel
Strand 3
C
126 131anti-parallel
Strand 4
C
139 145anti-parallel
Strand 5
C
171 177parallel
Strand 6
C
180 184anti-parallel
Strand 7
C
48 56parallel
Strand 8
C
187 188parallel
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There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
114 115first strand
Strand 2
C
121 122anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
198 199first strand
Strand 2
O
337 338parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
306 308first strand
Strand 2
M
530 532anti-parallel
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There are 8 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
426 430first strand
Strand 2
M
396 400anti-parallel
Strand 3
M
460 465anti-parallel
Strand 4
M
474 480anti-parallel
Strand 5
M
505 508parallel
Strand 6
M
519 522anti-parallel
Strand 7
M
377 386parallel
Strand 8
M
436 442anti-parallel
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There are 8 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
426 430first strand
Strand 2
M
396 400anti-parallel
Strand 3
M
460 465anti-parallel
Strand 4
M
474 480anti-parallel
Strand 5
M
505 508parallel
Strand 6
M
519 522anti-parallel
Strand 7
M
377 386parallel
Strand 8
M
525 527parallel
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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
M
447 449first strand
Strand 2
M
455 457anti-parallel
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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
N
307 308first strand
Strand 2
N
530 531anti-parallel
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There are 8 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
N
426 430first strand
Strand 2
N
396 400anti-parallel
Strand 3
N
460 465anti-parallel
Strand 4
N
474 480anti-parallel
Strand 5
N
505 508parallel
Strand 6
N
519 522anti-parallel
Strand 7
N
377 386parallel
Strand 8
N
436 442anti-parallel
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There are 8 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
N
426 430first strand
Strand 2
N
396 400anti-parallel
Strand 3
N
460 465anti-parallel
Strand 4
N
474 480anti-parallel
Strand 5
N
505 508parallel
Strand 6
N
519 522anti-parallel
Strand 7
N
377 386parallel
Strand 8
N
525 527parallel
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There are 2 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
N
447 449first strand
Strand 2
N
455 457anti-parallel
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There are 2 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
306 308first strand
Strand 2
O
530 532anti-parallel
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There are 8 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
426 430first strand
Strand 2
O
396 400anti-parallel
Strand 3
O
460 465anti-parallel
Strand 4
O
474 480anti-parallel
Strand 5
O
505 508parallel
Strand 6
O
519 522anti-parallel
Strand 7
O
377 386parallel
Strand 8
O
436 442anti-parallel
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There are 8 strands in U sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
426 430first strand
Strand 2
O
396 400anti-parallel
Strand 3
O
460 465anti-parallel
Strand 4
O
474 480anti-parallel
Strand 5
O
505 508parallel
Strand 6
O
519 522anti-parallel
Strand 7
O
377 386parallel
Strand 8
O
525 527parallel
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There are 2 strands in V sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
447 449first strand
Strand 2
O
455 457anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il