Analysis of interatomic Contacts of Structural Units in PDB entry:
3MVT


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3MVT entry

There are 2 chains in PDB entry 3MVT (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 4GLN 352
C
 THR 4GLN 352
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 3MVT. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
17 21Right-handed 310
Helix 2
2
A
23 35Right-handed alpha
Helix 3
3
A
42 51Right-handed alpha
Helix 4
4
A
57 73Right-handed alpha
Helix 5
5
A
75 93Right-handed alpha
Helix 6
6
A
104 108Right-handed 310
Helix 7
7
A
115 119Right-handed 310
Helix 8
8
A
125 145Right-handed alpha
Helix 9
9
A
158 160Right-handed 310
Helix 10
10
A
161 172Right-handed alpha
Helix 11
11
A
190 193Right-handed 310
Helix 12
12
A
194 208Right-handed alpha
Helix 13
13
A
220 230Right-handed alpha
Helix 14
14
A
240 244Right-handed 310
Helix 15
15
A
245 256Right-handed alpha
Helix 16
16
A
262 269Right-handed alpha
Helix 17
17
A
278 286Right-handed alpha
Helix 18
18
A
303 316Right-handed alpha
Helix 19
19
A
318 333Right-handed alpha
Helix 20
20
A
336 352Right-handed alpha
Helix 21
21
C
19 21Right-handed 310
Helix 22
22
C
23 35Right-handed alpha
Helix 23
23
C
42 51Right-handed alpha
Helix 24
24
C
57 73Right-handed alpha
Helix 25
25
C
75 93Right-handed alpha
Helix 26
26
C
104 108Right-handed 310
Helix 27
27
C
115 119Right-handed 310
Helix 28
28
C
125 145Right-handed alpha
Helix 29
29
C
158 160Right-handed 310
Helix 30
30
C
161 172Right-handed alpha
Helix 31
31
C
190 193Right-handed 310
Helix 32
32
C
194 207Right-handed alpha
Helix 33
33
C
220 230Right-handed alpha
Helix 34
34
C
240 244Right-handed 310
Helix 35
35
C
245 255Right-handed alpha
Helix 36
36
C
262 269Right-handed alpha
Helix 37
37
C
278 286Right-handed alpha
Helix 38
38
C
296 301Right-handed alpha
Helix 39
39
C
303 315Right-handed alpha
Helix 40
40
C
318 332Right-handed alpha
Helix 41
41
C
336 352Right-handed alpha
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There are 2 sheets in PDB entry 3MVT. Click on sheet of interest to get list of strands forming it: A, B,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 13first strand
Strand 2
A
95 102parallel
Strand 3
A
147 155parallel
Strand 4
A
177 183parallel
Strand 5
A
210 215parallel
Strand 6
A
235 238parallel
Strand 7
A
258 261parallel
Strand 8
A
289 292parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
11 17first strand
Strand 2
C
95 102parallel
Strand 3
C
147 155parallel
Strand 4
C
177 183parallel
Strand 5
C
210 215parallel
Strand 6
C
235 238parallel
Strand 7
C
258 261parallel
Strand 8
C
289 292parallel
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