Analysis of interatomic Contacts of Structural Units in PDB entry:
3MW4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3MW4 entry

There are 3 chains in PDB entry 3MW4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 79VAL 256
B
 GLY 79VAL 256
C
 GLY 79VAL 256
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 3MW4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
99 103Right-handed 310
Helix 2
2
A
215 219Right-handed 310
Helix 3
3
A
235 242Right-handed alpha
Helix 4
4
B
99 103Right-handed 310
Helix 5
5
B
215 219Right-handed 310
Helix 6
6
B
235 242Right-handed alpha
Helix 7
7
C
99 103Right-handed 310
Helix 8
8
C
215 219Right-handed 310
Helix 9
9
C
235 242Right-handed alpha
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There are 6 sheets in PDB entry 3MW4. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 11 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
157 160first strand
Strand 2
A
145 151anti-parallel
Strand 3
A
136 142anti-parallel
Strand 4
A
121 129anti-parallel
Strand 5
A
208 213anti-parallel
Strand 6
A
84 97anti-parallel
Strand 7
A
224 231anti-parallel
Strand 8
A
108 116anti-parallel
Strand 9
A
172 179anti-parallel
Strand 10
A
182 187anti-parallel
Strand 11
A
193 195anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
157 160first strand
Strand 2
A
145 151anti-parallel
Strand 3
A
136 142anti-parallel
Strand 4
A
121 129anti-parallel
Strand 5
A
208 213anti-parallel
Strand 6
A
84 97anti-parallel
Strand 7
A
247 256anti-parallel
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There are 11 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
156 160first strand
Strand 2
B
145 151anti-parallel
Strand 3
B
136 142anti-parallel
Strand 4
B
122 129anti-parallel
Strand 5
B
208 213anti-parallel
Strand 6
B
84 97anti-parallel
Strand 7
B
224 231anti-parallel
Strand 8
B
108 116anti-parallel
Strand 9
B
172 179anti-parallel
Strand 10
B
182 187anti-parallel
Strand 11
B
193 195anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
156 160first strand
Strand 2
B
145 151anti-parallel
Strand 3
B
136 142anti-parallel
Strand 4
B
122 129anti-parallel
Strand 5
B
208 213anti-parallel
Strand 6
B
84 97anti-parallel
Strand 7
B
247 255anti-parallel
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There are 11 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
157 160first strand
Strand 2
C
145 151anti-parallel
Strand 3
C
136 142anti-parallel
Strand 4
C
122 129anti-parallel
Strand 5
C
208 213anti-parallel
Strand 6
C
84 97anti-parallel
Strand 7
C
224 231anti-parallel
Strand 8
C
108 116anti-parallel
Strand 9
C
172 179anti-parallel
Strand 10
C
182 187anti-parallel
Strand 11
C
193 195anti-parallel
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There are 7 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
157 160first strand
Strand 2
C
145 151anti-parallel
Strand 3
C
136 142anti-parallel
Strand 4
C
122 129anti-parallel
Strand 5
C
208 213anti-parallel
Strand 6
C
84 97anti-parallel
Strand 7
C
247 256anti-parallel
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