Analysis of interatomic Contacts of Structural Units in PDB entry:
3MWF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3MWF entry

There is 1 chain in PDB entry 3MWF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 37GLN 328
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 16 helices in PDB entry 3MWF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
60 70Right-handed alpha
Helix 2
2
A
90 94Right-handed 310
Helix 3
3
A
107 114Right-handed alpha
Helix 4
4
A
123 127Right-handed alpha
Helix 5
5
A
129 137Right-handed alpha
Helix 6
6
A
147 160Right-handed alpha
Helix 7
7
A
161 188Right-handed alpha
Helix 8
8
A
189 191Right-handed 310
Helix 9
9
A
210 220Right-handed alpha
Helix 10
10
A
225 234Right-handed alpha
Helix 11
11
A
243 251Right-handed 310
Helix 12
12
A
267 279Right-handed alpha
Helix 13
13
A
280 286Right-handed alpha
Helix 14
14
A
286 291Right-handed alpha
Helix 15
15
A
299 304Right-handed alpha
Helix 16
16
A
308 323Right-handed alpha
Back to top of page

There are 4 sheets in PDB entry 3MWF. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 42first strand
Strand 2
A
45 49anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
98 99first strand
Strand 2
A
76 77parallel
Strand 3
A
56 58parallel
Strand 4
A
118 122parallel
Strand 5
A
139 142parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
101 102first strand
Strand 2
A
105 106anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
238 241first strand
Strand 2
A
205 208anti-parallel
Strand 3
A
195 200anti-parallel
Strand 4
A
254 259parallel
Strand 5
A
294 295parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il