Analysis of interatomic Contacts of Structural Units in PDB entry:
3MWQ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3MWQ entry

There is 1 chain in PDB entry 3MWQ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 1VAL 256
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 3MWQ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
3 13Right-handed alpha
Helix 2
2
A
24 33Right-handed alpha
Helix 3
3
A
50 57Right-handed alpha
Helix 4
4
A
58 60Right-handed 310
Helix 5
5
A
135 145Right-handed alpha
Helix 6
6
A
156 165Right-handed alpha
Helix 7
7
A
182 189Right-handed alpha
Helix 8
8
A
190 192Right-handed 310
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There are 4 sheets in PDB entry 3MWQ. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
43 47first strand
Strand 2
A
79 86anti-parallel
Strand 3
A
97 111anti-parallel
Strand 4
A
72 74anti-parallel
Strand 5
A
61 63anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
43 47first strand
Strand 2
A
79 86anti-parallel
Strand 3
A
97 111anti-parallel
Strand 4
A
116 124anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
175 179first strand
Strand 2
A
211 218anti-parallel
Strand 3
A
229 243anti-parallel
Strand 4
A
204 206anti-parallel
Strand 5
A
193 195anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
175 179first strand
Strand 2
A
211 218anti-parallel
Strand 3
A
229 243anti-parallel
Strand 4
A
248 256anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il