Analysis of interatomic Contacts of Structural Units in PDB entry:
3MY7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3MY7 entry

There are 4 chains in PDB entry 3MY7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 2ALA 449
B
 PRO 2ALA 449
C
 PRO 2ALA 449
D
 ASN 5ALA 150
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 72 helices in PDB entry 3MY7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
5 24Right-handed alpha
Helix 2
2
A
27 45Right-handed alpha
Helix 3
3
A
45 58Right-handed alpha
Helix 4
4
A
61 81Right-handed alpha
Helix 5
5
A
117 130Right-handed alpha
Helix 6
6
A
142 160Right-handed alpha
Helix 7
7
A
174 184Right-handed alpha
Helix 8
8
A
195 204Right-handed alpha
Helix 9
9
A
226 236Right-handed alpha
Helix 10
10
A
237 244Right-handed 310
Helix 11
11
A
258 268Right-handed alpha
Helix 12
12
A
275 286Right-handed alpha
Helix 13
13
A
294 297Right-handed 310
Helix 14
14
A
300 309Right-handed alpha
Helix 15
15
A
331 335Right-handed 310
Helix 16
16
A
349 365Right-handed alpha
Helix 17
17
A
379 390Right-handed alpha
Helix 18
18
A
435 438Right-handed 310
Helix 19
19
B
5 24Right-handed alpha
Helix 20
20
B
27 45Right-handed alpha
Helix 21
21
B
45 58Right-handed alpha
Helix 22
22
B
61 81Right-handed alpha
Helix 23
23
B
115 130Right-handed alpha
Helix 24
24
B
139 141Right-handed 310
Helix 25
25
B
142 160Right-handed alpha
Helix 26
26
B
174 184Right-handed alpha
Helix 27
27
B
195 203Right-handed alpha
Helix 28
28
B
226 236Right-handed alpha
Helix 29
29
B
239 243Right-handed 310
Helix 30
30
B
258 266Right-handed alpha
Helix 31
31
B
267 269Right-handed 310
Helix 32
32
B
275 287Right-handed alpha
Helix 33
33
B
300 309Right-handed alpha
Helix 34
34
B
349 364Right-handed alpha
Helix 35
35
B
379 390Right-handed alpha
Helix 36
36
B
435 438Right-handed 310
Helix 37
37
C
5 24Right-handed alpha
Helix 38
38
C
27 45Right-handed alpha
Helix 39
39
C
45 58Right-handed alpha
Helix 40
40
C
61 81Right-handed alpha
Helix 41
41
C
115 130Right-handed alpha
Helix 42
42
C
142 160Right-handed alpha
Helix 43
43
C
174 184Right-handed alpha
Helix 44
44
C
195 203Right-handed alpha
Helix 45
45
C
226 236Right-handed alpha
Helix 46
46
C
258 269Right-handed alpha
Helix 47
47
C
275 287Right-handed alpha
Helix 48
48
C
293 297Right-handed 310
Helix 49
49
C
300 309Right-handed alpha
Helix 50
50
C
331 335Right-handed 310
Helix 51
51
C
349 364Right-handed alpha
Helix 52
52
C
379 390Right-handed alpha
Helix 53
53
C
435 438Right-handed 310
Helix 54
54
D
5 25Right-handed alpha
Helix 55
55
D
27 45Right-handed alpha
Helix 56
56
D
45 58Right-handed alpha
Helix 57
57
D
61 81Right-handed alpha
Helix 58
58
D
115 130Right-handed alpha
Helix 59
59
D
139 141Right-handed 310
Helix 60
60
D
142 160Right-handed alpha
Helix 61
61
D
174 184Right-handed alpha
Helix 62
62
D
197 204Right-handed alpha
Helix 63
63
D
226 236Right-handed alpha
Helix 64
64
D
239 244Right-handed 310
Helix 65
65
D
256 266Right-handed alpha
Helix 66
66
D
267 269Right-handed 310
Helix 67
67
D
275 287Right-handed alpha
Helix 68
68
D
300 306Right-handed alpha
Helix 69
69
D
331 335Right-handed 310
Helix 70
70
D
349 363Right-handed alpha
Helix 71
71
D
379 390Right-handed alpha
Helix 72
72
D
435 438Right-handed 310
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There are 9 sheets in PDB entry 3MY7. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I,

There are 10 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
87 89first strand
Strand 2
A
98 103anti-parallel
Strand 3
A
440 446anti-parallel
Strand 4
D
394 397parallel
Strand 5
D
369 373parallel
Strand 6
D
217 221parallel
Strand 7
D
249 255parallel
Strand 8
D
341 347parallel
Strand 9
D
318 322parallel
Strand 10
D
271 274parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
167 169first strand
Strand 2
A
133 138parallel
Strand 3
A
106 111parallel
Strand 4
A
189 193parallel
Strand 5
A
209 212parallel
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There are 10 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
271 273first strand
Strand 2
A
318 322parallel
Strand 3
A
341 347parallel
Strand 4
A
249 255parallel
Strand 5
A
217 221parallel
Strand 6
A
369 373parallel
Strand 7
A
394 397parallel
Strand 8
D
440 447parallel
Strand 9
D
97 103anti-parallel
Strand 10
D
88 92anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
287 288first strand
Strand 2
A
291 292anti-parallel
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There are 10 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
88 92first strand
Strand 2
B
97 103anti-parallel
Strand 3
B
440 447anti-parallel
Strand 4
C
394 397parallel
Strand 5
C
369 373parallel
Strand 6
C
218 221parallel
Strand 7
C
251 255parallel
Strand 8
C
341 347parallel
Strand 9
C
318 322parallel
Strand 10
C
271 273parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
167 169first strand
Strand 2
B
133 137parallel
Strand 3
B
106 110parallel
Strand 4
B
189 193parallel
Strand 5
B
209 212parallel
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There are 10 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
271 273first strand
Strand 2
B
318 322parallel
Strand 3
B
341 347parallel
Strand 4
B
251 255parallel
Strand 5
B
218 221parallel
Strand 6
B
369 373parallel
Strand 7
B
394 397parallel
Strand 8
C
440 447parallel
Strand 9
C
97 103anti-parallel
Strand 10
C
88 92anti-parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
167 169first strand
Strand 2
C
133 138parallel
Strand 3
C
106 111parallel
Strand 4
C
187 193parallel
Strand 5
C
209 212parallel
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There are 5 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
167 169first strand
Strand 2
D
133 137parallel
Strand 3
D
106 110parallel
Strand 4
D
187 192parallel
Strand 5
D
209 211parallel
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