Analysis of interatomic Contacts of Structural Units in PDB entry:
3MYB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3MYB entry

There are 3 chains in PDB entry 3MYB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 3GLN 261
B
 GLU 3THR 259
C
 GLU 3GLN 261
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 3MYB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
22 26Right-handed 310
Helix 2
2
A
30 46Right-handed alpha
Helix 3
3
A
67 73Right-handed alpha
Helix 4
4
A
76 97Right-handed alpha
Helix 5
5
A
111 120Right-handed alpha
Helix 6
6
A
133 139Right-handed 310
Helix 7
7
A
142 150Right-handed alpha
Helix 8
8
A
154 165Right-handed alpha
Helix 9
9
A
170 177Right-handed alpha
Helix 10
10
A
184 186Right-handed 310
Helix 11
11
A
187 202Right-handed alpha
Helix 12
12
A
203 219Right-handed alpha
Helix 13
13
A
221 239Right-handed alpha
Helix 14
14
A
239 251Right-handed alpha
Helix 15
15
B
22 26Right-handed 310
Helix 16
16
B
30 46Right-handed alpha
Helix 17
17
B
67 73Right-handed alpha
Helix 18
18
B
76 97Right-handed alpha
Helix 19
19
B
111 120Right-handed alpha
Helix 20
20
B
133 139Right-handed 310
Helix 21
21
B
142 150Right-handed alpha
Helix 22
22
B
154 165Right-handed alpha
Helix 23
23
B
170 177Right-handed alpha
Helix 24
24
B
184 186Right-handed 310
Helix 25
25
B
187 202Right-handed alpha
Helix 26
26
B
203 218Right-handed alpha
Helix 27
27
B
221 238Right-handed alpha
Helix 28
28
B
239 251Right-handed alpha
Helix 29
29
C
22 26Right-handed 310
Helix 30
30
C
30 45Right-handed alpha
Helix 31
31
C
67 73Right-handed alpha
Helix 32
32
C
76 97Right-handed alpha
Helix 33
33
C
111 120Right-handed alpha
Helix 34
34
C
133 139Right-handed 310
Helix 35
35
C
142 150Right-handed alpha
Helix 36
36
C
154 165Right-handed alpha
Helix 37
37
C
170 177Right-handed alpha
Helix 38
38
C
184 186Right-handed 310
Helix 39
39
C
187 202Right-handed alpha
Helix 40
40
C
203 218Right-handed alpha
Helix 41
41
C
221 238Right-handed alpha
Helix 42
42
C
239 251Right-handed alpha
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There are 6 sheets in PDB entry 3MYB. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 10first strand
Strand 2
A
15 20anti-parallel
Strand 3
A
52 57parallel
Strand 4
A
101 105parallel
Strand 5
A
122 126parallel
Strand 6
A
181 183parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
109 110first strand
Strand 2
A
130 132parallel
Strand 3
A
168 169anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
6 10first strand
Strand 2
B
15 20anti-parallel
Strand 3
B
52 57parallel
Strand 4
B
101 105parallel
Strand 5
B
122 126parallel
Strand 6
B
181 183parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
109 110first strand
Strand 2
B
130 132parallel
Strand 3
B
168 169anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
6 10first strand
Strand 2
C
15 20anti-parallel
Strand 3
C
52 57parallel
Strand 4
C
101 105parallel
Strand 5
C
122 126parallel
Strand 6
C
181 183parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
109 110first strand
Strand 2
C
130 132parallel
Strand 3
C
168 169anti-parallel
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