Analysis of interatomic Contacts of Structural Units in PDB entry:
3MYU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3MYU entry

There are 2 chains in PDB entry 3MYU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 32GLY 367
B
 ASN 32GLY 367
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 37 helices in PDB entry 3MYU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
43 46Right-handed 310
Helix 2
2
A
47 64Right-handed alpha
Helix 3
3
A
76 86Right-handed alpha
Helix 4
4
A
95 99Right-handed 310
Helix 5
5
A
126 129Right-handed 310
Helix 6
6
A
130 145Right-handed alpha
Helix 7
7
A
147 151Right-handed 310
Helix 8
8
A
163 165Right-handed 310
Helix 9
9
A
185 199Right-handed alpha
Helix 10
10
A
200 206Right-handed alpha
Helix 11
11
A
220 232Right-handed alpha
Helix 12
12
A
237 245Right-handed alpha
Helix 13
13
A
253 257Right-handed 310
Helix 14
14
A
271 276Right-handed 310
Helix 15
15
A
317 334Right-handed alpha
Helix 16
16
A
339 344Right-handed 310
Helix 17
17
A
353 358Right-handed alpha
Helix 18
18
A
358 367Right-handed alpha
Helix 19
19
B
43 46Right-handed 310
Helix 20
20
B
47 64Right-handed alpha
Helix 21
21
B
76 86Right-handed alpha
Helix 22
22
B
95 99Right-handed 310
Helix 23
23
B
126 130Right-handed 310
Helix 24
24
B
131 144Right-handed alpha
Helix 25
25
B
147 151Right-handed 310
Helix 26
26
B
163 165Right-handed 310
Helix 27
27
B
185 198Right-handed alpha
Helix 28
28
B
200 206Right-handed alpha
Helix 29
29
B
220 232Right-handed alpha
Helix 30
30
B
233 235Right-handed 310
Helix 31
31
B
237 245Right-handed alpha
Helix 32
32
B
253 257Right-handed 310
Helix 33
33
B
271 276Right-handed 310
Helix 34
34
B
317 334Right-handed alpha
Helix 35
35
B
339 344Right-handed 310
Helix 36
36
B
353 358Right-handed alpha
Helix 37
37
B
358 367Right-handed alpha
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There are 6 sheets in PDB entry 3MYU. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
68 73first strand
Strand 2
A
33 38parallel
Strand 3
A
91 94parallel
Strand 4
A
309 313anti-parallel
Strand 5
A
107 118anti-parallel
Strand 6
A
167 173anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
68 73first strand
Strand 2
A
33 38parallel
Strand 3
A
91 94parallel
Strand 4
A
309 313anti-parallel
Strand 5
A
107 118anti-parallel
Strand 6
A
347 350anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
249 251first strand
Strand 2
A
209 211parallel
Strand 3
A
265 269parallel
Strand 4
A
175 184anti-parallel
Strand 5
A
295 306anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
68 73first strand
Strand 2
B
33 38parallel
Strand 3
B
91 94parallel
Strand 4
B
309 313anti-parallel
Strand 5
B
107 118anti-parallel
Strand 6
B
167 173anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
68 73first strand
Strand 2
B
33 38parallel
Strand 3
B
91 94parallel
Strand 4
B
309 313anti-parallel
Strand 5
B
107 118anti-parallel
Strand 6
B
347 350anti-parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
249 251first strand
Strand 2
B
209 211parallel
Strand 3
B
265 269parallel
Strand 4
B
175 184anti-parallel
Strand 5
B
295 306anti-parallel
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