Analysis of interatomic Contacts of Structural Units in PDB entry:
3MYX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3MYX entry

There are 2 chains in PDB entry 3MYX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 3THR 237
B
 GLN 3THR 237
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 2 helices in PDB entry 3MYX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
142 146Right-handed 310
Helix 2
2
B
142 146Right-handed 310
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There are 9 sheets in PDB entry 3MYX. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 10first strand
Strand 2
A
213 216anti-parallel
Strand 3
A
187 193anti-parallel
Strand 4
A
230 236anti-parallel
Strand 5
A
167 173anti-parallel
Strand 6
A
153 160anti-parallel
Strand 7
A
136 138anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
22 23first strand
Strand 2
A
36 41anti-parallel
Strand 3
A
46 53anti-parallel
Strand 4
A
108 115anti-parallel
Strand 5
A
65 72anti-parallel
Strand 6
A
91 94anti-parallel
Strand 7
A
126 129anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 59first strand
Strand 2
A
100 104anti-parallel
Strand 3
A
74 79anti-parallel
Strand 4
A
82 87anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
176 177first strand
Strand 2
A
221 226anti-parallel
Strand 3
A
181 182anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
176 177first strand
Strand 2
A
221 226anti-parallel
Strand 3
A
196 200anti-parallel
Strand 4
A
205 208anti-parallel
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There are 7 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
6 10first strand
Strand 2
B
213 216anti-parallel
Strand 3
B
187 193anti-parallel
Strand 4
B
230 236anti-parallel
Strand 5
B
167 173anti-parallel
Strand 6
B
153 160anti-parallel
Strand 7
B
136 138anti-parallel
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There are 7 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
22 23first strand
Strand 2
B
36 41anti-parallel
Strand 3
B
46 53anti-parallel
Strand 4
B
108 115anti-parallel
Strand 5
B
65 72anti-parallel
Strand 6
B
91 94anti-parallel
Strand 7
B
126 129anti-parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
56 59first strand
Strand 2
B
100 104anti-parallel
Strand 3
B
74 79anti-parallel
Strand 4
B
82 87anti-parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
181 182first strand
Strand 2
B
221 225anti-parallel
Strand 3
B
196 199anti-parallel
Strand 4
B
205 208anti-parallel
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