Analysis of interatomic Contacts of Structural Units in PDB entry:
3MZ1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 3MZ1 entry

There are 4 chains in PDB entry 3MZ1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 83ASN 294
B
 LEU 83ASN 294
C
 LEU 83GLY 295
D
 LEU 83ASN 294
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 3MZ1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
93 100Right-handed alpha
Helix 2
2
A
100 112Right-handed alpha
Helix 3
3
A
163 169Right-handed alpha
Helix 4
4
A
174 179Right-handed 310
Helix 5
5
A
219 229Right-handed alpha
Helix 6
6
A
238 247Right-handed alpha
Helix 7
7
A
275 293Right-handed alpha
Helix 8
8
B
93 100Right-handed alpha
Helix 9
9
B
100 112Right-handed alpha
Helix 10
10
B
163 169Right-handed alpha
Helix 11
11
B
174 179Right-handed 310
Helix 12
12
B
219 229Right-handed alpha
Helix 13
13
B
238 247Right-handed alpha
Helix 14
14
B
275 293Right-handed alpha
Helix 15
15
C
93 100Right-handed alpha
Helix 16
16
C
100 112Right-handed alpha
Helix 17
17
C
163 169Right-handed alpha
Helix 18
18
C
176 181Right-handed alpha
Helix 19
19
C
219 229Right-handed alpha
Helix 20
20
C
241 247Right-handed alpha
Helix 21
21
C
275 293Right-handed alpha
Helix 22
22
D
93 100Right-handed alpha
Helix 23
23
D
100 112Right-handed alpha
Helix 24
24
D
163 169Right-handed alpha
Helix 25
25
D
174 179Right-handed 310
Helix 26
26
D
219 229Right-handed alpha
Helix 27
27
D
238 247Right-handed alpha
Helix 28
28
D
269 273Right-handed 310
Helix 29
29
D
275 293Right-handed alpha
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There are 12 sheets in PDB entry 3MZ1. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
148 155first strand
Strand 2
A
262 268anti-parallel
Strand 3
A
135 139anti-parallel
Strand 4
A
86 92parallel
Strand 5
A
115 121parallel
Strand 6
B
213 217parallel
Strand 7
B
184 187parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
234 237first strand
Strand 2
A
157 162anti-parallel
Strand 3
A
250 252anti-parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
184 187first strand
Strand 2
A
213 217parallel
Strand 3
B
115 121parallel
Strand 4
B
86 92parallel
Strand 5
B
135 139parallel
Strand 6
B
262 268anti-parallel
Strand 7
B
148 155anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
198 202first strand
Strand 2
A
205 209anti-parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
234 237first strand
Strand 2
B
157 162anti-parallel
Strand 3
B
250 252anti-parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
205 209first strand
Strand 2
B
198 202anti-parallel
Strand 3
B
258 259anti-parallel
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There are 8 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
148 155first strand
Strand 2
C
262 268anti-parallel
Strand 3
C
135 139anti-parallel
Strand 4
C
86 92parallel
Strand 5
C
115 121parallel
Strand 6
D
213 217parallel
Strand 7
D
184 189parallel
Strand 8
D
194 195anti-parallel
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There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
234 237first strand
Strand 2
C
157 162anti-parallel
Strand 3
C
250 252anti-parallel
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There are 7 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
184 187first strand
Strand 2
C
213 217parallel
Strand 3
D
115 121parallel
Strand 4
D
86 92parallel
Strand 5
D
135 139parallel
Strand 6
D
262 268anti-parallel
Strand 7
D
148 155anti-parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
205 209first strand
Strand 2
C
198 202anti-parallel
Strand 3
C
258 259anti-parallel
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There are 3 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
234 237first strand
Strand 2
D
157 162anti-parallel
Strand 3
D
250 252anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
198 202first strand
Strand 2
D
205 209anti-parallel
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